Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC139713.2-214ENST00000642059 1811 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 SNORA56-201ENST00000383966 129 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 RN7SKP114-201ENST00000410327 279 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC010154.1-201ENST00000425857 269 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 MTCO1P39-201ENST00000426148 480 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 snoU13.24-201ENST00000458998 104 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 RPL23AP2-201ENST00000471227 466 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC078817.1-201ENST00000492623 435 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 RN7SL808P-201ENST00000496066 299 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC072052.1-201ENST00000496556 306 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 YWHAEP4-201ENST00000505390 198 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 ANXA2P1-201ENST00000505539 926 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 HMGN1P11-201ENST00000508668 303 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 Y_RNA.706-201ENST00000516933 99 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 RPL7P50-201ENST00000600588 727 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC009314.1-201ENST00000603871 304 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC010632.3-201ENST00000611377 369 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC112200.1-201ENST00000625015 234 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 ZNF826P-207ENST00000622273 1910 ntBASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
CUEDC1Q9NWM3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AL445487.1-201ENST00000415694 1580 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 UBE2WP1-201ENST00000362030 340 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 SNORA25.1-201ENST00000362326 128 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 RNA5SP305-201ENST00000362665 119 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 RNU6-449P-201ENST00000383914 107 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 Y_RNA.597-201ENST00000410463 100 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AC079780.1-201ENST00000428259 207 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 RPL7L1P9-201ENST00000431298 745 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 HMGB1P27-201ENST00000431429 603 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AC079354.2-201ENST00000453523 154 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 snoU13.4-201ENST00000458916 104 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 RNU7-87P-201ENST00000459343 62 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AC078918.1-201ENST00000498515 228 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 RNU7-175P-201ENST00000515915 61 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AC126177.5-201ENST00000549599 178 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 RN7SL356P-201ENST00000582228 248 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 RPL23AP78-201ENST00000599928 470 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AC123912.5-201ENST00000605470 343 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AC244107.2-201ENST00000611773 76 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AC109583.2-201ENST00000617367 129 ntBASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CUEDC1Q9NWM3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 NOL8P1-201ENST00000508336 3529 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 AC100778.3-201ENST00000580060 1750 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 U8.4-201ENST00000363626 134 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 RNU6-923P-201ENST00000364753 107 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 RNU6-1130P-201ENST00000365434 107 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 Y_RNA.405-201ENST00000383979 100 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 Y_RNA.451-201ENST00000384200 100 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 Y_RNA.524-201ENST00000384564 100 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 Y_RNA.534-201ENST00000384599 112 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 Y_RNA.561-201ENST00000384694 100 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 Y_RNA.569-201ENST00000384749 103 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 RNA5SP339-201ENST00000390987 122 ntBASIC5.17□□□□□ -1.58
CUEDC1Q9NWM3 RNA5SP239-201ENST00000410218 129 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms