Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 RNY1P12-201ENST00000364251 105 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 SNORA70.4-201ENST00000365509 134 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 RPL23AP32-201ENST00000395315 459 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 AL139397.2-201ENST00000404529 772 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 SAR1AP4-201ENST00000429225 591 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 MTATP6P17-201ENST00000431030 672 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 TAF9P1-201ENST00000445421 515 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 ST13P20-201ENST00000447996 1065 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 RPS15AP27-201ENST00000449183 343 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 TAF9P2-201ENST00000454958 515 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 RNA5SP269-201ENST00000459032 137 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 RN7SL633P-201ENST00000488974 297 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 SUMO2P6-201ENST00000505273 288 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 SEM1P1-201ENST00000506694 209 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 AC009901.1-201ENST00000506703 541 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 AC113155.1-201ENST00000511141 769 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 RN7SKP57-201ENST00000517248 293 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 AC087373.1-201ENST00000524920 491 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 AP003181.2-201ENST00000528941 181 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 OSBPL9P5-201ENST00000542581 171 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 MTND3P12-201ENST00000559068 328 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 AC004832.5-201ENST00000608677 401 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 AC099654.13-201ENST00000639774 207 ntBASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
BLOC1S4Q9NUP1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
BLOC1S4Q9NUP1 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
BLOC1S4Q9NUP1 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 GNG5P1-201ENST00000255500 204 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 RNU4-21P-201ENST00000362802 126 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 SNORD56.2-201ENST00000363242 71 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 SNORD21-201ENST00000383953 95 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 RNU1-73P-201ENST00000383971 164 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 SNORD116-8-201ENST00000384365 95 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 RNY3P9-201ENST00000384727 106 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 SNORA26.8-201ENST00000391306 124 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 RNA5SP274-201ENST00000410484 108 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 ELOCP4-201ENST00000420090 333 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AL589872.1-201ENST00000426602 288 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 RPS15AP5-201ENST00000436276 388 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC098831.1-201ENST00000440661 216 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 COX6CP2-201ENST00000444980 225 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 RPL21P41-201ENST00000459863 264 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 MTND3P7-201ENST00000474435 343 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 BET1P1-201ENST00000482276 359 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 MTND1P3-201ENST00000484956 952 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 RN7SKP282-201ENST00000516824 299 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 MIR5195-201ENST00000583555 115 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC009977.1-201ENST00000586015 570 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 HMGN1P30-201ENST00000589286 268 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC010620.2-201ENST00000600135 313 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 MTND4LP5-201ENST00000605152 292 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC002064.3-201ENST00000623448 346 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC090617.7-201ENST00000623952 126 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 MTND5P42-201ENST00000637720 498 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 CR848007.1-201ENST00000442354 1699 ntBASIC3.33□□□□□ -1.88
BLOC1S4Q9NUP1 AC110491.1-201ENST00000562191 2010 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 RNU6-14P-201ENST00000384630 106 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 MIR301A-201ENST00000385261 86 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 RPS12P24-201ENST00000412619 387 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AC096649.2-201ENST00000416186 393 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 GTF2IP20-201ENST00000431663 360 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 RPL36AP6-201ENST00000435770 321 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 RPS24P13-201ENST00000442520 397 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AL671855.1-201ENST00000446875 1203 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 MTATP6P7-201ENST00000453315 681 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 AP003122.4-201ENST00000530980 758 ntBASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.32□□□□□ -1.88
BLOC1S4Q9NUP1 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms