Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 AC090136.1-201ENST00000520009 240 ntBASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 AP003122.3-201ENST00000526316 255 ntBASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 AC084851.1-201ENST00000529105 249 ntBASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 ATP1B3P1-201ENST00000605365 821 ntBASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 AC103710.3-201ENST00000608157 948 ntBASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 AC128687.2-201ENST00000609657 566 ntBASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 AL132765.2-201ENST00000610812 351 ntBASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 AC048347.1-201ENST00000624621 427 ntBASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCM2LQ9NUG4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AL359693.1-201ENST00000614959 2407 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 RNU4-73P-201ENST00000363164 141 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 Y_RNA.480-201ENST00000384364 102 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AL122016.1-201ENST00000403365 367 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 HSPE1P26-201ENST00000405341 275 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AL139095.3-201ENST00000419672 1203 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 OR4C10P-201ENST00000434991 931 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 HMGB3P11-201ENST00000440127 604 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 MTCO1P29-201ENST00000496868 288 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 SNORA14.1-201ENST00000516113 141 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AP000889.2-201ENST00000532684 490 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC063950.1-201ENST00000552036 308 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC025884.1-201ENST00000556034 378 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC026464.5-201ENST00000562497 722 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 MIR1273C-201ENST00000578669 77 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 MIR4719-201ENST00000585233 84 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC006130.2-201ENST00000586202 326 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC006133.1-201ENST00000617106 264 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 RNA5SP196-201ENST00000625967 102 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 MFSD8-242ENST00000641690 4199 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.98□□□□□ -1.77
CCM2LQ9NUG4 AC008725.1-201ENST00000605123 2263 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 Y_RNA.184-201ENST00000363884 108 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 RN7SKP280-201ENST00000364196 304 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 RNA5SP175-201ENST00000364275 119 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 SNORA62.3-201ENST00000365110 153 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 SNORA4.3-201ENST00000365564 137 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 RPS4XP7-201ENST00000406274 780 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 MIR1179-201ENST00000408703 91 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 RNU6-628P-201ENST00000410675 107 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 RNU2-37P-201ENST00000410695 177 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 RPL21P90-201ENST00000415692 466 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 HMGB1P18-201ENST00000438801 619 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 HSFY6P-201ENST00000445573 403 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 AC008716.1-201ENST00000511084 513 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 Y_RNA.691-201ENST00000516611 103 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 MIR2114-201ENST00000516645 80 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 CYCSP27-201ENST00000527643 293 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 OR8R1P-201ENST00000543943 764 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 ZNF192P1-203ENST00000565888 810 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 AC012119.1-201ENST00000603184 222 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 MIR486-1-201ENST00000612171 68 ntBASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.97□□□□□ -1.77
CCM2LQ9NUG4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms