Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 RNY3P13-201ENST00000365542 102 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 MTCO1P39-201ENST00000426148 480 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AC133104.1-201ENST00000429100 218 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 OR2B8P-201ENST00000432841 938 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 MTND3P21-201ENST00000433774 331 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AC090774.1-201ENST00000435925 246 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AC004801.2-202ENST00000463559 283 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AC107401.1-201ENST00000503426 685 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 RNA5SP217-201ENST00000515959 91 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AC100870.1-201ENST00000522035 505 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 MTCO3P24-201ENST00000572729 782 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 MIR4319-201ENST00000577285 85 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 FAM60BP-201ENST00000578364 658 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 ATP1B3P1-201ENST00000605365 821 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AC012443.1-201ENST00000605605 231 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AC008962.1-201ENST00000605729 304 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AC138649.3-201ENST00000622154 254 ntBASIC3.49□□□□□ -1.85
DDX4Q9NQI0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
DDX4Q9NQI0 RNU5E-8P-201ENST00000363502 116 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 SNORA20.2-201ENST00000383922 131 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AL136372.1-201ENST00000403060 228 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AF274854.1-201ENST00000413236 615 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 MTCO1P21-201ENST00000416634 589 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 BX295541.1-201ENST00000417774 250 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 YPEL5P1-201ENST00000419731 367 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 ELOCP4-201ENST00000420090 333 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 PPP1R11P2-201ENST00000423543 382 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 RPS3AP44-201ENST00000425466 790 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 RPL21P40-201ENST00000428586 483 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AC104850.1-201ENST00000435940 476 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 RPL21P8-201ENST00000465083 535 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 HMGB1P29-201ENST00000505659 499 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 RNA5SP337-201ENST00000517007 109 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AC005951.1-201ENST00000576706 485 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 ELOCP29-201ENST00000588193 334 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AL133393.1-201ENST00000603277 287 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AL592295.2-201ENST00000612578 206 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 TUG1_2.1-201ENST00000614234 87 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 OR5AK4P-201ENST00000635912 903 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 AC002546.1-201ENST00000588041 2504 ntBASIC3.48□□□□□ -1.85
DDX4Q9NQI0 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.48□□□□□ -1.85
DDX4Q9NQI0 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC009812.4-201ENST00000569134 1805 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 Y_RNA.6-201ENST00000362350 114 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 SNORD56.3-201ENST00000363507 71 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 U3.11-201ENST00000364476 212 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 RN7SKP226-201ENST00000364912 300 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 GSTA9P-201ENST00000406231 611 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 Y_RNA.599-201ENST00000410489 109 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 Y_RNA.619-201ENST00000410951 90 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 RNU6-195P-201ENST00000411352 109 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AL645937.1-202ENST00000421799 937 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC104651.1-201ENST00000427559 735 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 RPL31P35-201ENST00000431058 377 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 SNRPEP4-201ENST00000435815 279 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC005094.1-201ENST00000440420 368 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 RPS24P13-201ENST00000442520 397 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 MTCO3P45-201ENST00000443036 613 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC079448.1-201ENST00000449377 373 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.47□□□□□ -1.85
DDX4Q9NQI0 SRRM1P2-201ENST00000464531 1192 ntBASIC3.47□□□□□ -1.85
DDX4Q9NQI0 AC108078.1-201ENST00000508073 725 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms