Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RN7SKP49-201ENST00000516675 260 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 AC091152.3-201ENST00000604227 325 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 MIR6883-201ENST00000614952 78 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 AC141273.2-201ENST00000618989 130 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 AC127024.6-201ENST00000621598 424 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 AC011266.1-201ENST00000624119 3569 ntBASIC6.69□□□□□ -1.34
RTN4Q9NQC3 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RTN4Q9NQC3 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 RNA5SP346-201ENST00000363541 121 ntBASIC6.68□□□□□ -1.34
RTN4Q9NQC3 MIR147B-201ENST00000390185 80 ntBASIC6.68□□□□□ -1.34
RTN4Q9NQC3 RNU6-1093P-201ENST00000391194 107 ntBASIC6.68□□□□□ -1.34
RTN4Q9NQC3 EI24P2-201ENST00000397776 1076 ntBASIC6.68□□□□□ -1.34
RTN4Q9NQC3 AL033519.1-201ENST00000407266 307 ntBASIC6.68□□□□□ -1.34
RTN4Q9NQC3 AC012306.1-201ENST00000423267 114 ntBASIC6.68□□□□□ -1.34
RTN4Q9NQC3 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 RPL23AP40-201ENST00000487630 390 ntBASIC6.68□□□□□ -1.34
RTN4Q9NQC3 IGHVIII-11-1-201ENST00000522733 267 ntBASIC6.68□□□□□ -1.34
RTN4Q9NQC3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 MIR6774-201ENST00000614651 70 ntBASIC6.68□□□□□ -1.34
RTN4Q9NQC3 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RTN4Q9NQC3 FAP-203ENST00000443424 2598 ntTSL 2 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 RNU6-159P-201ENST00000391080 106 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 MIR320B2-201ENST00000408479 138 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 RNU2-38P-201ENST00000410856 79 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 AC245096.1-201ENST00000413104 546 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 AC108479.1-201ENST00000431142 427 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 OR6D1P-201ENST00000436165 939 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 RPEP4-201ENST00000437636 602 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 HMGN2P7-201ENST00000456186 273 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 AC146944.2-203ENST00000502493 354 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 AC139495.1-202ENST00000513164 354 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 CYCSP23-201ENST00000519781 313 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 AC027288.2-201ENST00000553028 243 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 SDR42E1P4-201ENST00000620894 481 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 NEAT1-202ENST00000501122 22743 ntBASIC6.67□□□□□ -1.34
RTN4Q9NQC3 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RTN4Q9NQC3 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
RTN4Q9NQC3 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.66□□□□□ -1.34
RTN4Q9NQC3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
RTN4Q9NQC3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RTN4Q9NQC3 Y_RNA.26-201ENST00000362539 101 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 RNA5SP375-201ENST00000362975 119 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 U8.10-201ENST00000384260 133 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 RNU6ATAC23P-201ENST00000408448 123 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 RNU6-1203P-201ENST00000410703 110 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 RN7SKP58-201ENST00000411010 305 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.66□□□□□ -1.34
RTN4Q9NQC3 RN7SL790P-201ENST00000474043 298 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 RPL30P12-201ENST00000474666 353 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 RN7SL812P-201ENST00000493791 279 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.66□□□□□ -1.34
RTN4Q9NQC3 MIR744-201ENST00000578242 98 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 MIR4300-201ENST00000581016 96 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 MIR5010-201ENST00000582846 120 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.66□□□□□ -1.34
RTN4Q9NQC3 AL356575.1-201ENST00000603008 283 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 AC089999.3-201ENST00000622440 577 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 AC068213.1-201ENST00000625124 226 ntBASIC6.66□□□□□ -1.34
RTN4Q9NQC3 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
RTN4Q9NQC3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
RTN4Q9NQC3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
RTN4Q9NQC3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
RTN4Q9NQC3 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.65□□□□□ -1.34
RTN4Q9NQC3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC6.65□□□□□ -1.34
RTN4Q9NQC3 Y_RNA.84-201ENST00000363011 104 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 136.1 ms