Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC124947.2-202ENST00000552735 133 ntBASIC1.36□□□□□ -2.19
KIAA1549Q9HCM3 MTCYBP27-201ENST00000555160 670 ntBASIC1.36□□□□□ -2.19
KIAA1549Q9HCM3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.36□□□□□ -2.19
KIAA1549Q9HCM3 HMGN2P15-201ENST00000585707 270 ntBASIC1.36□□□□□ -2.19
KIAA1549Q9HCM3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.36□□□□□ -2.19
KIAA1549Q9HCM3 AC007038.2-201ENST00000608095 740 ntBASIC1.36□□□□□ -2.19
KIAA1549Q9HCM3 OR10AB1P-201ENST00000609613 938 ntBASIC1.36□□□□□ -2.19
KIAA1549Q9HCM3 RMST_6.1-201ENST00000611980 203 ntBASIC1.36□□□□□ -2.19
KIAA1549Q9HCM3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.36□□□□□ -2.19
KIAA1549Q9HCM3 AC091925.2-201ENST00000625059 256 ntBASIC1.36□□□□□ -2.19
KIAA1549Q9HCM3 ADAM3A-203ENST00000461344 2157 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AC025263.3-201ENST00000622965 1396 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 HMGB1P5-201ENST00000255320 642 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 RNU6-53P-201ENST00000365367 106 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AL033519.2-201ENST00000403958 392 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 RN7SKP158-201ENST00000410453 326 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 USP9YP19-201ENST00000412165 485 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 USP9YP13-201ENST00000417797 480 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 PNRC2P1-201ENST00000423940 420 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 Z82210.1-201ENST00000440037 231 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 MTATP6P7-201ENST00000453315 681 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 MTND2P6-201ENST00000455337 1030 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 PMCHL2-203ENST00000457791 237 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 RPL30P5-201ENST00000494923 336 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 MRPS17P9-201ENST00000511924 393 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 RNU6-416P-201ENST00000516265 103 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 SNORA48.10-201ENST00000516965 160 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 IGJP1-201ENST00000522682 475 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 NDUFS5P6-201ENST00000529136 295 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AL161670.1-201ENST00000554348 137 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 SNORD39.3-201ENST00000584451 71 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 GDI2P1-201ENST00000429312 1336 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AC080128.1-201ENST00000474389 1917 ntBASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
KIAA1549Q9HCM3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 RNU6-741P-201ENST00000383889 107 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 RNU6-1083P-201ENST00000384022 107 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 FGF7P8-201ENST00000402994 292 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 MIR1304-201ENST00000408243 91 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 AC023141.4-201ENST00000412031 328 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 Z85995.1-201ENST00000415547 335 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 EDDM3CP-201ENST00000415977 425 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 AC093422.3-201ENST00000428506 305 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 AL590233.1-201ENST00000430017 456 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 AL451074.3-201ENST00000437709 472 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 AC002542.1-201ENST00000440683 193 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 GPM6BP3-201ENST00000442797 145 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 ANKRD26P4-201ENST00000455755 950 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 AC008127.2-201ENST00000549925 1075 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 HSBP1P1-201ENST00000555205 166 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 MTND4LP5-201ENST00000605152 292 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 MIR4275-201ENST00000636486 87 ntBASIC1.34□□□□□ -2.19
KIAA1549Q9HCM3 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 RNA5SP363-201ENST00000365072 115 ntBASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 SNORD51.1-201ENST00000365405 77 ntBASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 AL354695.1-201ENST00000427935 228 ntBASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 FGF7P5-201ENST00000441829 291 ntBASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 COX7A2P2-201ENST00000505291 250 ntBASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 AC093752.1-206ENST00000511823 336 ntBASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 MIR4421-201ENST00000578133 69 ntBASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 AL096840.1-201ENST00000603287 93 ntBASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 AL161423.1-201ENST00000613700 262 ntBASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 AP003399.1-201ENST00000637534 361 ntBASIC1.34□□□□□ -2.2
KIAA1549Q9HCM3 DBF4P1-201ENST00000412976 1892 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 OR1L1-202ENST00000373686 1083 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 MTCO2P31-201ENST00000402702 684 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AL445183.3-201ENST00000414168 502 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 AC074117.2-201ENST00000417130 397 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.33□□□□□ -2.2
KIAA1549Q9HCM3 HMGB1P27-201ENST00000431429 603 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms