Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RPS27AP13-201ENST00000498403 237 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AC026782.1-201ENST00000512952 449 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 RNU1-54P-201ENST00000517181 120 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AC090115.3-201ENST00000553218 849 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AL121576.1-201ENST00000556055 276 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 BNIP3P5-201ENST00000562290 498 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AC113195.1-201ENST00000579952 141 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AC018889.1-201ENST00000605372 397 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 DLEU2_5.1-201ENST00000615567 84 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 AC005086.4-201ENST00000623065 213 ntBASIC4.45□□□□□ -1.7
RNF38Q9H0F5 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RNF38Q9H0F5 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 RNU1-20P-201ENST00000363314 162 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 RNU6-450P-201ENST00000364654 107 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 RNU6-99P-201ENST00000364721 107 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 SMIM11P1-201ENST00000369586 178 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 RNU1-44P-201ENST00000384453 163 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 RNA5SP372-201ENST00000390836 115 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 SNORA57.1-201ENST00000391227 145 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 MIR1911-201ENST00000410783 80 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 RNA5SP111-201ENST00000411386 101 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AC080125.1-201ENST00000414888 684 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 SSXP9-201ENST00000417503 292 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 TOMM22P1-201ENST00000418578 312 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AC008267.5-201ENST00000424928 265 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 HMGB1P12-201ENST00000438594 598 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AC133473.1-201ENST00000455173 299 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AC010285.1-201ENST00000470580 392 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AC010655.3-201ENST00000478818 450 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 RN7SL817P-201ENST00000480777 288 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 RN7SL432P-201ENST00000484057 298 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AF213884.1-201ENST00000488102 463 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 MRPS35P2-201ENST00000508242 191 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AL592156.1-201ENST00000508758 304 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AC099522.1-202ENST00000514718 367 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AC026801.2-201ENST00000515352 425 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 RNU6-685P-201ENST00000517088 95 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AC087854.1-201ENST00000519706 414 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AC009570.1-201ENST00000609599 745 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 MIR6867-201ENST00000610636 67 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 MIR6130-201ENST00000619419 109 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.44□□□□□ -1.7
RNF38Q9H0F5 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RNF38Q9H0F5 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 MIR372-201ENST00000362225 67 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 Y_RNA.389-201ENST00000383924 113 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 RNU6-1181P-201ENST00000384191 106 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 SNORA37-201ENST00000384504 129 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 Y_RNA.512-201ENST00000384518 102 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 RNU6-328P-201ENST00000390887 106 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 SNORD66.1-201ENST00000391230 76 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AL139039.1-201ENST00000401900 692 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 RNU2-43P-201ENST00000410306 190 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 RN7SKP177-201ENST00000410567 355 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AL356095.1-201ENST00000417217 199 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 RPL7P37-201ENST00000425095 738 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC093151.1-201ENST00000427711 313 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 CALM2P2-201ENST00000428512 440 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC117503.1-201ENST00000472241 394 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AP000926.1-201ENST00000479573 241 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 RNU6-470P-201ENST00000515954 104 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 RNU6-388P-201ENST00000517012 105 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 RNU6-389P-201ENST00000517048 105 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 RNU6-323P-201ENST00000521915 107 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.43□□□□□ -1.7
RNF38Q9H0F5 RPL21P7-201ENST00000557463 483 ntBASIC4.43□□□□□ -1.7
RNF38Q9H0F5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms