Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 RNU6-512P-201ENST00000364438 103 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 SNORA70.2-201ENST00000364506 135 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AL590704.1-201ENST00000402856 794 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 HSPE1P26-201ENST00000405341 275 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 RNU6-628P-201ENST00000410675 107 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 RNU2-37P-201ENST00000410695 177 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 RHEBP3-201ENST00000411920 351 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AL160275.3-201ENST00000423876 471 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AC017083.1-201ENST00000428093 483 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 HSPD1P21-201ENST00000436541 245 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 SCARNA18-201ENST00000459004 134 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AC004801.2-202ENST00000463559 283 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 RNA5SP471-201ENST00000516971 106 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AC090877.1-201ENST00000561418 344 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AC053481.4-201ENST00000583164 216 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 AL133383.2-201ENST00000622958 2336 ntBASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
TRIM54Q9BYV2 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 Y_RNA.245-201ENST00000364493 95 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 MIR23A-201ENST00000385245 73 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AL139039.1-201ENST00000401900 692 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AL139397.2-201ENST00000404529 772 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 RNU2-33P-201ENST00000410344 192 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 RPL21P109-201ENST00000422213 475 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AL592045.1-201ENST00000429867 352 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AL117339.2-201ENST00000430475 180 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 USP9YP8-201ENST00000441913 500 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AC007547.1-201ENST00000462177 490 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 TTC39CP1-201ENST00000512513 755 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 RNA5SP290-201ENST00000517133 127 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AC023050.3-201ENST00000541142 333 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 MIR5583-1-201ENST00000580941 59 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AC093227.2-201ENST00000589357 285 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AL161798.1-201ENST00000604630 131 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AC009570.1-201ENST00000609599 745 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AC083809.1-201ENST00000615051 472 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AC090617.10-201ENST00000624308 134 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AL512643.1-201ENST00000635735 524 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 AL353746.1-201ENST00000566293 6881 ntBASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
TRIM54Q9BYV2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 MIR423-201ENST00000362201 94 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 Y_RNA.70-201ENST00000362886 110 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 Y_RNA.100-201ENST00000363141 102 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 AC068538.1-201ENST00000376856 336 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 RNU6-767P-201ENST00000384132 107 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 RNU1-13P-201ENST00000384499 162 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 RNU6-1127P-201ENST00000384580 107 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 RNU6-1197P-201ENST00000391183 107 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 SNORA3.3-201ENST00000408712 125 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 Y_RNA.615-201ENST00000410769 117 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 PIGFP3-201ENST00000441918 722 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 RPL7P12-201ENST00000446719 750 ntBASIC3.75□□□□□ -1.81
TRIM54Q9BYV2 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms