Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC1.54□□□□□ -2.16
SCAPERQ9BY12 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SCAPERQ9BY12 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
SCAPERQ9BY12 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC1.54□□□□□ -2.16
SCAPERQ9BY12 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SCAPERQ9BY12 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
SCAPERQ9BY12 MTND4P31-201ENST00000425607 1343 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 SFR1P1-201ENST00000403720 688 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 AL133384.1-201ENST00000412744 351 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 ARL2BPP3-201ENST00000421226 480 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 SDAD1P3-201ENST00000427380 333 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.53□□□□□ -2.16
SCAPERQ9BY12 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.53□□□□□ -2.16
SCAPERQ9BY12 AC009296.1-201ENST00000443146 155 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.53□□□□□ -2.16
SCAPERQ9BY12 GDI2P2-201ENST00000445131 608 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 RPS27P1-201ENST00000450552 247 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 RPL31P41-201ENST00000477967 372 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 RNU6-1004P-201ENST00000516584 111 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC1.53□□□□□ -2.16
SCAPERQ9BY12 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC1.53□□□□□ -2.16
SCAPERQ9BY12 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.53□□□□□ -2.16
SCAPERQ9BY12 DPRXP5-201ENST00000604662 539 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.53□□□□□ -2.16
SCAPERQ9BY12 AP003072.5-201ENST00000623872 773 ntBASIC1.53□□□□□ -2.16
SCAPERQ9BY12 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
SCAPERQ9BY12 AC010099.1-201ENST00000455434 375 ntBASIC1.52□□□□□ -2.17
SCAPERQ9BY12 AL583843.1-201ENST00000456070 346 ntBASIC1.52□□□□□ -2.17
SCAPERQ9BY12 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.52□□□□□ -2.17
SCAPERQ9BY12 AC098862.1-201ENST00000504991 413 ntBASIC1.52□□□□□ -2.17
SCAPERQ9BY12 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.52□□□□□ -2.17
SCAPERQ9BY12 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.52□□□□□ -2.17
SCAPERQ9BY12 AC084033.1-201ENST00000550830 633 ntBASIC1.52□□□□□ -2.17
SCAPERQ9BY12 AC087481.2-201ENST00000565492 330 ntBASIC1.52□□□□□ -2.17
SCAPERQ9BY12 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.52□□□□□ -2.17
SCAPERQ9BY12 TEX21P-201ENST00000447107 1476 ntBASIC1.52□□□□□ -2.17
SCAPERQ9BY12 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SCAPERQ9BY12 SNORA62.1-201ENST00000364287 154 ntBASIC1.51□□□□□ -2.17
SCAPERQ9BY12 Y_RNA.295-201ENST00000364918 102 ntBASIC1.51□□□□□ -2.17
SCAPERQ9BY12 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
SCAPERQ9BY12 MIR625-201ENST00000385047 85 ntBASIC1.51□□□□□ -2.17
SCAPERQ9BY12 MIR216A-201ENST00000385063 110 ntBASIC1.51□□□□□ -2.17
SCAPERQ9BY12 RNU6-955P-201ENST00000410497 104 ntBASIC1.51□□□□□ -2.17
SCAPERQ9BY12 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.51□□□□□ -2.17
SCAPERQ9BY12 AC096751.1-202ENST00000502691 1067 ntBASIC1.51□□□□□ -2.17
SCAPERQ9BY12 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.51□□□□□ -2.17
SCAPERQ9BY12 AC021087.2-201ENST00000504656 1203 ntBASIC1.51□□□□□ -2.17
SCAPERQ9BY12 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.51□□□□□ -2.17
SCAPERQ9BY12 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.51□□□□□ -2.17
SCAPERQ9BY12 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.51□□□□□ -2.17
SCAPERQ9BY12 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.51□□□□□ -2.17
SCAPERQ9BY12 AL161629.2-201ENST00000615347 275 ntBASIC1.51□□□□□ -2.17
SCAPERQ9BY12 AL360181.4-201ENST00000621752 134 ntBASIC1.51□□□□□ -2.17
SCAPERQ9BY12 RNA5SP354-201ENST00000391247 136 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.5□□□□□ -2.17
SCAPERQ9BY12 TMEM167AP1-201ENST00000423409 219 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 AL590233.1-201ENST00000430017 456 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 EIF4EP3-201ENST00000498782 656 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 RN7SKP179-201ENST00000516126 217 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 SNORA31.18-201ENST00000517043 134 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 MTCYBP23-201ENST00000558717 1102 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 AC023824.2-201ENST00000566185 400 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC1.5□□□□□ -2.17
SCAPERQ9BY12 SNORD14A-201ENST00000606526 91 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 AL050343.2-201ENST00000607338 280 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 AL161423.1-201ENST00000613700 262 ntBASIC1.5□□□□□ -2.17
SCAPERQ9BY12 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.5□□□□□ -2.17
SCAPERQ9BY12 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
SCAPERQ9BY12 RNU6-185P-201ENST00000384421 107 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AL356432.1-201ENST00000405809 419 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SCAPERQ9BY12 THAP5P1-201ENST00000439089 262 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AC021382.1-201ENST00000483523 359 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 OR9N1P-202ENST00000494289 481 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 RPS27P26-201ENST00000494583 239 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AC114801.2-201ENST00000503825 781 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AC022447.3-201ENST00000506865 495 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 NDUFB4P2-201ENST00000509515 391 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.49□□□□□ -2.17
SCAPERQ9BY12 RNU6-1308P-201ENST00000516817 103 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 XIAPP1-201ENST00000603162 600 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AL020996.3-201ENST00000606617 222 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.49□□□□□ -2.17
SCAPERQ9BY12 MIR6857-201ENST00000613267 93 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AL356473.1-201ENST00000406203 1408 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.49□□□□□ -2.17
SCAPERQ9BY12 SNORA68.1-201ENST00000364537 132 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SCAPERQ9BY12 Z86062.1-201ENST00000406773 777 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 CYCSP48-201ENST00000417124 323 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.49□□□□□ -2.17
SCAPERQ9BY12 TPT1P8-201ENST00000510120 555 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AC108157.1-201ENST00000510511 539 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 CR383656.8-201ENST00000549046 145 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AC233266.2-201ENST00000567067 528 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 AC090666.1-201ENST00000578241 445 ntBASIC1.49□□□□□ -2.17
SCAPERQ9BY12 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms