Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR218-2-201ENST00000385006 110 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 SNORA48.4-201ENST00000391089 134 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 MIR1302-4-201ENST00000408701 150 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 EBAG9P1-201ENST00000418955 543 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 REREP1Y-201ENST00000422655 198 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 RPL21P40-201ENST00000428586 483 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 RPS29P17-201ENST00000430795 166 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 REREP2Y-201ENST00000439103 200 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 SCARNA22-201ENST00000503991 125 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 GLUD1P3-202ENST00000508551 200 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 HMGB3P3-201ENST00000510526 400 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 SNORA25.12-201ENST00000516202 82 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 RNU6-390P-201ENST00000516259 103 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 RNU7-121P-201ENST00000516604 62 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 RNU7-110P-201ENST00000516891 62 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 AP004242.1-201ENST00000533701 349 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 AC091979.2-201ENST00000607514 214 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 AC140479.6-201ENST00000633535 357 ntBASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
COL25A1Q9BXS0 AC004944.1-201ENST00000517807 3059 ntBASIC5.09□□□□□ -1.6
COL25A1Q9BXS0 AC083837.1-201ENST00000565297 2994 ntBASIC5.09□□□□□ -1.6
COL25A1Q9BXS0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.6
COL25A1Q9BXS0 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
COL25A1Q9BXS0 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AC097461.1-201ENST00000568928 2821 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AC073346.2-201ENST00000624724 2058 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 Y_RNA.7-201ENST00000362352 102 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 Y_RNA.217-201ENST00000364214 105 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 GNG5P2-201ENST00000372054 207 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 RNU6-147P-201ENST00000383983 107 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 SNORA20-201ENST00000384662 132 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 RNU6-239P-201ENST00000390990 99 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 RNA5SP89-201ENST00000410300 108 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AL096701.2-201ENST00000416920 238 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 IFNA11P-201ENST00000446352 526 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 Y_RNA.641-201ENST00000459414 105 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 RPL23AP56-201ENST00000460778 453 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 UQCRHP4-201ENST00000471686 272 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 RN7SL165P-201ENST00000477476 291 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AC091912.1-201ENST00000511351 248 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 IGLVIV-65-201ENST00000517313 360 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 SUMO2P18-201ENST00000518873 252 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 MIR4286-201ENST00000580651 93 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AC008749.1-201ENST00000597650 306 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 MIR6129-201ENST00000616087 109 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AC012442.3-202ENST00000636742 206 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 AC020656.2-201ENST00000613291 5309 ntBASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
COL25A1Q9BXS0 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 RNA5SP119-201ENST00000362715 117 ntBASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
COL25A1Q9BXS0 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms