Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 SNORA31.8-201ENST00000516327 108 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 SNORA18.6-201ENST00000516792 115 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC100870.1-201ENST00000522035 505 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 MIR5680-201ENST00000577577 84 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC093227.2-201ENST00000589357 285 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AL136363.2-201ENST00000604173 851 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AL049779.4-201ENST00000604500 156 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC019159.1-201ENST00000605094 187 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC008277.2-201ENST00000605196 797 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AL139286.2-201ENST00000606838 396 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC005046.1-201ENST00000608515 625 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC104237.2-201ENST00000612456 443 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 TUG1_2.1-201ENST00000614234 87 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC072046.2-201ENST00000618366 268 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 CR381653.2-201ENST00000624041 768 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AC092593.1-201ENST00000515413 1815 ntBASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
CCDC28BQ9BUN5 SDAD1P2-201ENST00000441308 2028 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 DEFB108F-201ENST00000344638 222 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 MIR26A1-201ENST00000362205 77 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 SNORA63.1-201ENST00000362493 131 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 RNU4-1-201ENST00000363925 141 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 U3.19-201ENST00000390893 196 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AL512633.1-201ENST00000399931 655 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 ELOCP17-201ENST00000414751 326 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 BX682237.1-201ENST00000415016 335 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 C1DP2-201ENST00000418167 426 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AC019097.1-201ENST00000424783 735 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 DLGAP5P1-201ENST00000430307 464 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AC091390.1-201ENST00000433904 331 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 USP9YP15-201ENST00000442391 422 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 ELOCP30-201ENST00000447108 299 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 RPS29P12-201ENST00000460178 152 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 KLF3P2-201ENST00000465138 268 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 RPL27AP5-201ENST00000469428 449 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 CDC42P4-201ENST00000510507 563 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 SNORA31.22-201ENST00000517204 135 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 MTCO2P4-201ENST00000517968 247 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 RPL12P50-201ENST00000603116 116 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AC004067.1-201ENST00000608733 700 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 AL391813.2-201ENST00000609113 322 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 Z99129.1-201ENST00000612510 255 ntBASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CCDC28BQ9BUN5 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC138915.1-201ENST00000565427 1685 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 RNY4P34-201ENST00000364779 95 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 RNU1-64P-201ENST00000365443 163 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 HMGN2P30-201ENST00000423237 256 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 UBE2D3P2-201ENST00000424409 445 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC005300.1-201ENST00000428401 373 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AL589823.1-201ENST00000429577 183 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 USP9YP14-201ENST00000430663 563 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC005094.1-201ENST00000440420 368 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 RPL26P6-201ENST00000440913 438 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 MTCO3P45-201ENST00000443036 613 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 MRPL50P4-201ENST00000446432 475 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AL136380.1-201ENST00000447970 162 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 RPL37P4-201ENST00000448908 268 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 TPT1P7-201ENST00000458300 517 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 RN7SL542P-201ENST00000467147 294 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 RPS15AP36-201ENST00000492022 382 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC010587.1-201ENST00000505809 469 ntBASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.74□□□□□ -1.97
CCDC28BQ9BUN5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms