Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CDX2Q99626 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.22□□□□□ -2.05
CDX2Q99626 SLC10A5P1-201ENST00000379063 1306 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CDX2Q99626 SNORA25.6-201ENST00000364121 118 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 Y_RNA.234-201ENST00000364409 97 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 ERHP2-201ENST00000402323 299 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 MTCO2P5-201ENST00000422621 426 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.22□□□□□ -2.05
CDX2Q99626 RPL36AP6-201ENST00000435770 321 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.22□□□□□ -2.05
CDX2Q99626 SDCBPP1-201ENST00000440192 890 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDX2Q99626 MTCO2P25-201ENST00000447065 681 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 ZNF886P-201ENST00000450781 723 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC2.22□□□□□ -2.05
CDX2Q99626 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.22□□□□□ -2.05
CDX2Q99626 SNORD121B-201ENST00000458838 81 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.22□□□□□ -2.05
CDX2Q99626 AC021146.8-201ENST00000507455 733 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.22□□□□□ -2.05
CDX2Q99626 MIR449C-201ENST00000516047 92 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 RNU6-528P-201ENST00000516926 100 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.22□□□□□ -2.05
CDX2Q99626 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.22□□□□□ -2.05
CDX2Q99626 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.22□□□□□ -2.05
CDX2Q99626 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDX2Q99626 MIR5194-201ENST00000582634 120 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AC091057.3-201ENST00000602684 733 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AL158050.2-201ENST00000605336 568 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AC016597.2-201ENST00000613256 341 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AC009831.4-201ENST00000620744 325 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AC002550.2-201ENST00000621246 394 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 AC011330.2-201ENST00000621680 635 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.22□□□□□ -2.05
CDX2Q99626 AL356473.1-201ENST00000406203 1408 ntBASIC2.22□□□□□ -2.05
CDX2Q99626 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CDX2Q99626 MTND4P9-201ENST00000507819 1346 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 AC011477.1-204ENST00000623416 1325 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 AL079343.1-201ENST00000572358 1771 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDX2Q99626 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDX2Q99626 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.21□□□□□ -2.06
CDX2Q99626 MIR21-201ENST00000362134 72 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-1-201ENST00000383898 107 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-42P-201ENST00000384165 107 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-36P-201ENST00000384172 107 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-4P-201ENST00000384205 107 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-5P-201ENST00000384238 107 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-3P-201ENST00000384314 107 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-2-201ENST00000384627 107 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-9-201ENST00000384776 107 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-33P-201ENST00000384793 107 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-952P-201ENST00000391164 108 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.21□□□□□ -2.06
CDX2Q99626 RPL23AP29-201ENST00000397284 453 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 AL021407.1-201ENST00000404531 386 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.21□□□□□ -2.06
CDX2Q99626 AL356320.2-201ENST00000417263 507 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX2Q99626 AL513175.2-201ENST00000422071 443 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 NDUFB4P7-201ENST00000423198 363 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RPL7P37-201ENST00000425095 738 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 MTND4P6-201ENST00000438297 472 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 MTND1P26-201ENST00000440488 538 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX2Q99626 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX2Q99626 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX2Q99626 AC097493.1-201ENST00000463958 372 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 AC104164.3-201ENST00000467363 1258 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX2Q99626 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX2Q99626 AC087359.1-201ENST00000508335 1740 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 CDC42P4-201ENST00000510507 563 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX2Q99626 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-798P-201ENST00000516912 103 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 MTCO1P47-201ENST00000523889 1271 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDX2Q99626 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.21□□□□□ -2.06
CDX2Q99626 CYCSP2-201ENST00000558168 301 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
CDX2Q99626 AL353997.4-201ENST00000586196 166 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 RNU6-6P-201ENST00000606623 107 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX2Q99626 AL121652.1-201ENST00000608851 448 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 Y_RNA.783-201ENST00000613546 102 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 AC006378.2-201ENST00000623178 2476 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 AC027309.3-201ENST00000623419 351 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.21□□□□□ -2.06
CDX2Q99626 AC110079.1-202ENST00000635213 138 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDX2Q99626 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CDX2Q99626 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.21□□□□□ -2.06
CDX2Q99626 AC135776.4-201ENST00000624300 1904 ntBASIC2.21□□□□□ -2.06
CDX2Q99626 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CDX2Q99626 ZNF519P1-201ENST00000449011 1626 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AC008568.2-201ENST00000623862 2313 ntBASIC2.2□□□□□ -2.06
CDX2Q99626 AL022578.1-201ENST00000439330 1433 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 113.3 ms