Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3□□□□□ -1.93
CDCA3Q99618 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3□□□□□ -1.93
CDCA3Q99618 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3□□□□□ -1.93
CDCA3Q99618 MIR4474-201ENST00000579189 78 ntBASIC3□□□□□ -1.93
CDCA3Q99618 AC005771.1-201ENST00000585581 349 ntBASIC3□□□□□ -1.93
CDCA3Q99618 NBR2-204ENST00000587322 63 ntBASIC3□□□□□ -1.93
CDCA3Q99618 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3□□□□□ -1.93
CDCA3Q99618 AC103710.1-201ENST00000610003 901 ntBASIC3□□□□□ -1.93
CDCA3Q99618 AC048344.4-201ENST00000619744 527 ntBASIC3□□□□□ -1.93
CDCA3Q99618 AC092608.2-201ENST00000624427 218 ntBASIC3□□□□□ -1.93
CDCA3Q99618 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDCA3Q99618 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CDCA3Q99618 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.99□□□□□ -1.93
CDCA3Q99618 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.99□□□□□ -1.93
CDCA3Q99618 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDCA3Q99618 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDCA3Q99618 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.99□□□□□ -1.93
CDCA3Q99618 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDCA3Q99618 RNU1-75P-201ENST00000347264 129 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 MIR514A1-201ENST00000385133 98 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AL138827.1-201ENST00000402666 306 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 MRPL42P2-201ENST00000403169 426 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 RPS3AP3-201ENST00000411933 242 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 ELOCP17-201ENST00000414751 326 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AL589872.1-201ENST00000426602 288 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.99□□□□□ -1.93
CDCA3Q99618 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.99□□□□□ -1.93
CDCA3Q99618 PGBD4P3-201ENST00000440731 581 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 USP9YP29-201ENST00000445112 563 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.99□□□□□ -1.93
CDCA3Q99618 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CDCA3Q99618 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.99□□□□□ -1.93
CDCA3Q99618 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.99□□□□□ -1.93
CDCA3Q99618 RNU6-956P-201ENST00000458868 103 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AC128713.1-201ENST00000471495 306 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.99□□□□□ -1.93
CDCA3Q99618 NDUFB4P2-201ENST00000509515 391 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AC068657.1-201ENST00000520807 306 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.99□□□□□ -1.93
CDCA3Q99618 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.99□□□□□ -1.93
CDCA3Q99618 AC006362.1-201ENST00000567392 174 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AC137800.2-201ENST00000574375 120 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 MIR4506-201ENST00000584693 77 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AL133393.1-201ENST00000603277 287 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 SEPT7P9-203ENST00000604116 343 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AP000254.1-201ENST00000609934 520 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AC010133.1-201ENST00000615809 842 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AC108479.2-201ENST00000617314 601 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
CDCA3Q99618 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.99□□□□□ -1.93
CDCA3Q99618 AC243829.7-201ENST00000633081 225 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.99□□□□□ -1.93
CDCA3Q99618 AC099654.13-201ENST00000639774 207 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CDCA3Q99618 AC092104.1-201ENST00000497346 1441 ntBASIC2.99□□□□□ -1.93
CDCA3Q99618 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.99□□□□□ -1.93
CDCA3Q99618 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDCA3Q99618 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC2.98□□□□□ -1.93
CDCA3Q99618 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CDCA3Q99618 RPL7P26-201ENST00000333817 754 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 Y_RNA.553-201ENST00000384670 102 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CDCA3Q99618 RPS15AP12-201ENST00000419498 388 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 SDCBPP3-201ENST00000419629 891 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 RPL7P46-201ENST00000425129 740 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC2.98□□□□□ -1.93
CDCA3Q99618 AC010153.1-201ENST00000432862 727 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 RPL23AP22-201ENST00000437556 453 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 AC005094.1-201ENST00000440420 368 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 AL022238.1-201ENST00000442557 355 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 MTCO1P19-201ENST00000443487 500 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 RPL37P4-201ENST00000448908 268 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.98□□□□□ -1.93
CDCA3Q99618 AC093392.2-201ENST00000450682 337 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.98□□□□□ -1.93
CDCA3Q99618 snoU109.1-201ENST00000459339 135 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 SNORD42A-201ENST00000459584 64 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 MTND4LP3-201ENST00000468320 276 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 UBL5P3-201ENST00000475112 231 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.98□□□□□ -1.93
CDCA3Q99618 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.98□□□□□ -1.93
CDCA3Q99618 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.98□□□□□ -1.93
CDCA3Q99618 AP002453.2-201ENST00000533503 320 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 AP000873.5-201ENST00000533906 236 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CDCA3Q99618 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.98□□□□□ -1.93
CDCA3Q99618 AL512310.1-201ENST00000548639 172 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.98□□□□□ -1.93
CDCA3Q99618 AL355836.1-201ENST00000555951 870 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.98□□□□□ -1.93
CDCA3Q99618 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC2.98□□□□□ -1.93
CDCA3Q99618 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.98□□□□□ -1.93
CDCA3Q99618 AC008277.2-201ENST00000605196 797 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 AC087752.4-201ENST00000605911 462 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 AC006338.1-201ENST00000618453 749 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 AC090582.1-201ENST00000636321 199 ntBASIC2.98□□□□□ -1.93
CDCA3Q99618 AL390237.1-201ENST00000404226 1415 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms