Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 RNA5SP290-201ENST00000517133 127 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 MIR4293-201ENST00000584305 78 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 UCA1.1-201ENST00000620952 75 ntBASIC2.82□□□□□ -1.96
ZNF560Q96MR9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
ZNF560Q96MR9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 RNU6-1180P-201ENST00000364935 107 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 UBE2V1P2-201ENST00000397758 440 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 RPLP0P7-201ENST00000416050 667 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 MTND2P9-201ENST00000422293 931 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 XKRYP1-201ENST00000423438 492 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AL358075.3-201ENST00000426289 226 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 ELOCP14-201ENST00000428070 331 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 GTF2IP20-201ENST00000431663 360 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 XKRYP2-201ENST00000432915 492 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC236972.1-201ENST00000433225 199 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 ELOCP7-201ENST00000439968 331 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 OR6C5P-201ENST00000452388 923 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 UBE2DNL-203ENST00000474922 222 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 RPS27AP9-201ENST00000477681 438 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 RPL31P41-201ENST00000477967 372 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC126182.1-201ENST00000478134 357 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC113155.1-201ENST00000511141 769 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 RNU6-1003P-201ENST00000517099 105 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC022634.1-201ENST00000520765 532 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC025281.1-201ENST00000567026 265 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC002400.1-201ENST00000569310 726 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC010546.1-201ENST00000569391 485 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 HMGN2P15-201ENST00000585707 270 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC107214.2-201ENST00000608204 634 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 OR10AB1P-201ENST00000609613 938 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC245517.5-201ENST00000611529 162 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC008498.1-201ENST00000613012 531 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 AC021755.4-201ENST00000616620 456 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 MTND5P29-201ENST00000458676 1807 ntBASIC2.81□□□□□ -1.96
ZNF560Q96MR9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
ZNF560Q96MR9 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 RNU6-884P-201ENST00000363889 107 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 Y_RNA.245-201ENST00000364493 95 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 RNU1-100P-201ENST00000365255 165 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AL590004.2-201ENST00000404787 371 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 DNAJA1P2-201ENST00000421360 1197 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 SNRPEP9-201ENST00000436794 238 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 MRPL50P4-201ENST00000446432 475 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 RPS15AP27-201ENST00000449183 343 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 SUMO2P6-201ENST00000505273 288 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 RNU6-678P-201ENST00000516832 109 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 ELOCP32-201ENST00000548625 324 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AC128657.1-201ENST00000549459 145 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AC022022.2-201ENST00000602989 360 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AC034102.8-201ENST00000615146 484 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 AL359693.1-201ENST00000614959 2407 ntBASIC2.8□□□□□ -1.96
ZNF560Q96MR9 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ZNF560Q96MR9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 RNU6-1167P-201ENST00000363227 94 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AL513477.1-202ENST00000417061 214 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 ZNF90P2-204ENST00000419323 1075 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AC098614.2-201ENST00000426040 255 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.79□□□□□ -1.96
ZNF560Q96MR9 TIMM9P1-201ENST00000436122 256 ntBASIC2.79□□□□□ -1.96
ZNF560Q96MR9 AC011816.1-201ENST00000441346 546 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms