Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 UCA1.1-201ENST00000620952 75 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 AL159972.1-201ENST00000625150 448 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
LINC00477Q96M19 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC00477Q96M19 AL138713.1-201ENST00000624026 2130 ntBASIC2.02□□□□□ -2.09
LINC00477Q96M19 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC00477Q96M19 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LINC00477Q96M19 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LINC00477Q96M19 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LINC00477Q96M19 U3.20-201ENST00000390909 217 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 RPS4XP7-201ENST00000406274 780 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 RPS27AP14-201ENST00000422868 454 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC098614.2-201ENST00000426040 255 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AL356583.2-201ENST00000426536 280 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC093106.2-201ENST00000428212 385 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 MTND1P28-201ENST00000435623 950 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 AL831737.1-201ENST00000441288 271 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 MTND2P4-201ENST00000445034 1004 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 TAF9P1-201ENST00000445421 515 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 RGS5-217ENST00000451759 835 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 TAF9P2-201ENST00000454958 515 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 RPS29P26-201ENST00000477483 171 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 RAP1BP2-201ENST00000478270 544 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 RPS15AP36-201ENST00000492022 382 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 AL359273.1-201ENST00000510918 627 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 RNA5SP471-201ENST00000516971 106 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 RNU6-1220P-201ENST00000517126 108 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC106038.2-201ENST00000520706 568 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 MIR3118-1-201ENST00000581787 76 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 MIR3670-2-201ENST00000582974 65 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 MIR3670-1-201ENST00000584160 65 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 MIR3670-3-201ENST00000584855 65 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC011451.2-201ENST00000604303 598 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 MIR3670-4-201ENST00000612260 65 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 MIR7844-201ENST00000616161 122 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC00477Q96M19 AL603755.1-201ENST00000619504 163 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 MIR8057-201ENST00000620957 69 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 AC068057.2-201ENST00000624047 895 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 OR5H6-203ENST00000642105 978 ntBASIC2.01□□□□□ -2.09
LINC00477Q96M19 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LINC00477Q96M19 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LINC00477Q96M19 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LINC00477Q96M19 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
LINC00477Q96M19 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
LINC00477Q96M19 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2□□□□□ -2.09
LINC00477Q96M19 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2□□□□□ -2.09
LINC00477Q96M19 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
LINC00477Q96M19 U3.4-201ENST00000363352 213 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 RNU4-1-201ENST00000363925 141 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 RNU6-501P-201ENST00000364072 100 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 SNORA23-201ENST00000365128 182 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 RNU6-637P-201ENST00000384050 107 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 SNORA18.3-201ENST00000384122 132 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 RNU6-297P-201ENST00000384636 107 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 MIR524-201ENST00000385242 87 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 MIR767-201ENST00000390228 109 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AL138827.1-201ENST00000402666 306 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2□□□□□ -2.09
LINC00477Q96M19 UBE2FP1-201ENST00000416536 447 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC007283.2-201ENST00000424739 197 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2□□□□□ -2.09
LINC00477Q96M19 AC092573.2-201ENST00000434546 243 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC112220.1-201ENST00000434628 355 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 RPL37P21-201ENST00000435890 276 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2□□□□□ -2.09
LINC00477Q96M19 MTCYBP39-201ENST00000437562 491 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AL121871.1-201ENST00000443413 436 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2□□□□□ -2.09
LINC00477Q96M19 COX6CP12-201ENST00000446748 202 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2□□□□□ -2.09
LINC00477Q96M19 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2□□□□□ -2.09
LINC00477Q96M19 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2□□□□□ -2.09
LINC00477Q96M19 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms