Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TRIM47Q96LD4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 RNU6-595P-201ENST00000363944 107 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 SNORD113.2-201ENST00000364166 89 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 SNORA2.3-201ENST00000383920 135 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 MIR23B-201ENST00000384832 97 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 RPL21P75-201ENST00000396599 483 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 RPL21P28-201ENST00000401418 483 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AL590556.1-201ENST00000423231 483 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AL591704.1-201ENST00000432574 275 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 RPL7AP61-201ENST00000443410 636 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 RPL21P11-201ENST00000461458 483 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 RPL21P39-201ENST00000463605 483 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AC022034.3-201ENST00000471393 478 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 RPL23AP65-201ENST00000475608 468 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AC132942.1-201ENST00000486753 483 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AC093591.1-201ENST00000491435 481 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 RPL21P16-201ENST00000495531 483 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AC113155.1-201ENST00000511141 769 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AC037487.3-201ENST00000606668 112 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 MIR6716-201ENST00000613413 80 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 BX005214.3-202ENST00000619809 325 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 Y_RNA.778-201ENST00000620203 90 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 AC039056.2-201ENST00000622261 511 ntBASIC5.66□□□□□ -1.5
TRIM47Q96LD4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
TRIM47Q96LD4 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AL022322.2-201ENST00000624072 20397 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AL121950.1-201ENST00000624993 2077 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 RNU6-933P-201ENST00000384424 107 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 RNA5SP494-201ENST00000410653 129 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 RPEP3-201ENST00000425462 676 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 MTND4LP9-201ENST00000427694 174 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 COX6CP13-201ENST00000428703 226 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 RPS29P9-201ENST00000440360 171 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 SNORD121B-201ENST00000458838 81 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 PLGLA-201ENST00000465668 449 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AC010618.1-201ENST00000469924 477 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AC069113.1-201ENST00000517763 267 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AC023824.2-201ENST00000566185 400 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 MIR3684-201ENST00000579779 74 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AC005191.1-201ENST00000603950 358 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AC138965.3-201ENST00000623875 498 ntBASIC5.65□□□□□ -1.5
TRIM47Q96LD4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.65□□□□□ -1.5
TRIM47Q96LD4 AC022031.1-201ENST00000585985 2593 ntBASIC5.65□□□□□ -1.51
TRIM47Q96LD4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM47Q96LD4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
TRIM47Q96LD4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.51
TRIM47Q96LD4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM47Q96LD4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM47Q96LD4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.65□□□□□ -1.51
TRIM47Q96LD4 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
TRIM47Q96LD4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 RNU6-270P-201ENST00000364131 105 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 RNY3P4-201ENST00000384428 101 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 RNU6-45P-201ENST00000384471 107 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 SNORA70.10-201ENST00000384515 134 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 RNU6-429P-201ENST00000384582 108 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 AL513475.1-201ENST00000406602 315 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 MIR1302-4-201ENST00000408701 150 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 RPL23AP38-201ENST00000423801 469 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 RPL21P129-201ENST00000491732 478 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 SCARNA22-201ENST00000503991 125 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 AC087369.1-201ENST00000520775 996 ntBASIC5.64□□□□□ -1.51
TRIM47Q96LD4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.64□□□□□ -1.51
TRIM47Q96LD4 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms