Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC091812.1-201ENST00000432235 1948 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 AC114546.3-201ENST00000623582 1734 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
SPG11Q96JI7 SFR1P1-201ENST00000403720 688 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
SPG11Q96JI7 MTND2P2-201ENST00000434633 945 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 PABPC1P3-201ENST00000469174 459 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 HMGN2P13-201ENST00000476476 274 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC0.71□□□□□ -2.3
SPG11Q96JI7 AC096745.1-201ENST00000509945 370 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 AC084757.1-201ENST00000559987 490 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 MTRNR2L2-201ENST00000604882 87 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 AC006213.5-201ENST00000619673 288 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 AC006001.4-201ENST00000622243 395 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
SPG11Q96JI7 AL137003.2-201ENST00000606924 2538 ntBASIC0.71□□□□□ -2.3
SPG11Q96JI7 AC073464.3-201ENST00000422564 712 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 AC015922.2-201ENST00000435593 184 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 AL353706.1-201ENST00000436728 494 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 OARD1-209ENST00000471367 401 ntTSL 2 BASIC0.7□□□□□ -2.3
SPG11Q96JI7 Y_RNA.654-201ENST00000497848 106 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 FAM106CP-201ENST00000582212 507 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 OR4G3P-201ENST00000633500 913 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 RNU6-1320P-201ENST00000390838 107 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 RNU6-1269P-201ENST00000391139 107 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 UBBP3-201ENST00000445497 241 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC0.7□□□□□ -2.3
SPG11Q96JI7 RNU6-599P-201ENST00000459383 107 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 RNU6-1193P-201ENST00000459461 107 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 AC098591.2-201ENST00000510152 315 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 SNORA48.11-201ENST00000517015 89 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC0.7□□□□□ -2.3
SPG11Q96JI7 CYP2C61P-201ENST00000604072 290 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 RNU6-368P-201ENST00000620928 107 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 RNU6-538P-201ENST00000622329 107 ntBASIC0.7□□□□□ -2.3
SPG11Q96JI7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.7□□□□□ -2.3
SPG11Q96JI7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC0.7□□□□□ -2.3
SPG11Q96JI7 OR4G2P-201ENST00000328113 903 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 RNU6-700P-201ENST00000391043 107 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 AC009302.1-201ENST00000417147 390 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 HMGB3P10-201ENST00000434734 572 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.69□□□□□ -2.3
SPG11Q96JI7 Z96811.1-201ENST00000445880 108 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.69□□□□□ -2.3
SPG11Q96JI7 AC022880.1-201ENST00000534017 973 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.69□□□□□ -2.3
SPG11Q96JI7 MIR5194-201ENST00000582634 120 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 AC123786.2-201ENST00000603459 275 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 MTND4P27-201ENST00000450813 1354 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC0.69□□□□□ -2.3
SPG11Q96JI7 AC241520.1-201ENST00000422654 1099 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC0.69□□□□□ -2.3
SPG11Q96JI7 MRPS33P3-201ENST00000513456 322 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 SNORD59.2-201ENST00000516873 68 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.69□□□□□ -2.3
SPG11Q96JI7 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.69□□□□□ -2.3
SPG11Q96JI7 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.69□□□□□ -2.3
SPG11Q96JI7 AC068831.7-201ENST00000616954 363 ntBASIC0.69□□□□□ -2.3
SPG11Q96JI7 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC0.69□□□□□ -2.3
SPG11Q96JI7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
SPG11Q96JI7 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.68□□□□□ -2.3
SPG11Q96JI7 Y_RNA.35-201ENST00000362601 101 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 MIR150-201ENST00000385048 84 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 RNA5SP63-201ENST00000391225 112 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SPG11Q96JI7 SDAD1P3-201ENST00000427380 333 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 MED14P1-201ENST00000430517 648 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.68□□□□□ -2.3
SPG11Q96JI7 BTF3P12-201ENST00000519620 469 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 AL163153.1-201ENST00000554223 283 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SPG11Q96JI7 AC093510.2-201ENST00000562820 896 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 RPL21P136-201ENST00000605378 396 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 AP000654.2-201ENST00000605633 586 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 CCNB2P1-201ENST00000399411 1150 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 SNX3P1X-201ENST00000414887 175 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 AC092648.1-201ENST00000425870 423 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 AC093716.1-201ENST00000435923 377 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC0.68□□□□□ -2.3
SPG11Q96JI7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC0.68□□□□□ -2.3
SPG11Q96JI7 AC009318.3-201ENST00000616916 503 ntBASIC0.68□□□□□ -2.3
SPG11Q96JI7 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SPG11Q96JI7 RNU4-72P-201ENST00000410754 173 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.67□□□□□ -2.3
SPG11Q96JI7 AC079780.1-201ENST00000428259 207 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 AC097493.1-201ENST00000463958 372 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 RPS27P21-201ENST00000486977 252 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC0.67□□□□□ -2.3
SPG11Q96JI7 RNU6-942P-201ENST00000363002 107 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 SNORD23.1-201ENST00000408212 104 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 AC096533.1-201ENST00000411645 353 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 LSM1P1-201ENST00000438629 273 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 CASP3P1-201ENST00000446037 609 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.67□□□□□ -2.3
SPG11Q96JI7 C1DP3-201ENST00000455013 423 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 SUB1P1-201ENST00000524415 382 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 AC068714.1-201ENST00000559623 800 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
SPG11Q96JI7 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms