Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 OR5H15-201ENST00000383696 930 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 SNORA80E-201ENST00000384744 137 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 TXNP7-201ENST00000406296 293 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RNA5SP425-201ENST00000410336 112 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RN7SKP223-201ENST00000410582 62 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 VN1R51P-201ENST00000411675 945 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 MORF4L1P6-201ENST00000418771 268 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC007919.1-201ENST00000429380 217 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 SNRPEP7-201ENST00000438350 220 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 MTCO1P27-201ENST00000448269 226 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RPL21P134-201ENST00000453468 483 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RPL12P25-201ENST00000455592 494 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RN7SL429P-201ENST00000479090 223 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RN7SL489P-201ENST00000486185 223 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 MRPL42P6-201ENST00000486397 371 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RN7SL327P-201ENST00000488659 223 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC109445.1-201ENST00000512356 383 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RNU1-41P-201ENST00000516161 162 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RNA5SP200-201ENST00000516360 103 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RNU1-48P-201ENST00000516400 162 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 SCARNA11.3-201ENST00000517276 130 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 BNIP3P27-201ENST00000599991 412 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC006270.3-201ENST00000605967 1036 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC135507.1-201ENST00000607214 561 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AF129408.1-201ENST00000608767 431 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC245297.2-201ENST00000610119 565 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC013412.1-201ENST00000610687 192 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC005332.10-201ENST00000612725 619 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC008498.1-201ENST00000613012 531 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 SDR42E1P2-201ENST00000614861 481 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 RN7SL853P-201ENST00000617250 223 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AL049777.1-201ENST00000622740 518 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC099063.3-201ENST00000642066 185 ntBASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.24□□□□□ -2.05
ECHDC3Q96DC8 MTND4P35-201ENST00000604257 1375 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 Y_RNA.192-201ENST00000363977 102 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 RNU6-289P-201ENST00000364093 107 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 SNORD116.1-201ENST00000365628 92 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 RN7SKP192-201ENST00000411291 327 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 USP9YP13-201ENST00000417797 480 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 RPS3AP37-201ENST00000419176 745 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 ATP5F1P1-201ENST00000433775 569 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 OR10R1P-201ENST00000441524 1141 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 MTND1P16-201ENST00000465177 898 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 RPS29P20-201ENST00000489592 171 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 SCARNA17.1-201ENST00000516211 143 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 SCARNA17.2-201ENST00000516334 143 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 HMGN1P28-201ENST00000521340 364 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 AC121758.2-201ENST00000553271 193 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 YWHAZP1-201ENST00000556286 722 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 MIR3945-201ENST00000581853 98 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 SCARNA17.4-201ENST00000614296 143 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 AC093591.3-201ENST00000634516 308 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 AC116618.1-201ENST00000634617 774 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 CU459211.1-201ENST00000635667 749 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 U2.21-201ENST00000637295 81 ntBASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.23□□□□□ -2.05
ECHDC3Q96DC8 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 RNU6-884P-201ENST00000363889 107 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 RNU6-1328P-201ENST00000410938 106 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 HMGB1P49-201ENST00000418882 569 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 SEPT2P1-201ENST00000419651 180 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 USP9YP26-201ENST00000421008 661 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 BPY2DP-201ENST00000422208 265 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 RPS15AP5-201ENST00000436276 388 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 MTCO3P45-201ENST00000443036 613 ntBASIC2.22□□□□□ -2.05
ECHDC3Q96DC8 RPL32P28-201ENST00000443577 397 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms