Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 NDUFB4P5-201ENST00000415445 361 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC092809.3-201ENST00000415453 231 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 BX842559.1-201ENST00000419615 532 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 HSPE1P1-201ENST00000421494 318 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 SNORA71B-202ENST00000439232 272 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 RPS29P7-201ENST00000439662 171 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 TXNP1-201ENST00000441872 371 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC087588.1-201ENST00000462203 316 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 RN7SL132P-201ENST00000478131 296 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC083904.1-201ENST00000487828 231 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 RN7SL323P-201ENST00000494712 295 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC103851.1-201ENST00000506833 274 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 RAC1P2-201ENST00000511164 579 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC112206.3-201ENST00000514578 389 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 SNORA19.2-201ENST00000516013 114 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 MIR2114-201ENST00000516645 80 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 RNU6-143P-201ENST00000516942 93 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC105029.1-201ENST00000520250 669 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AP004242.1-201ENST00000533701 349 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AP000763.2-201ENST00000540641 163 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AL118558.2-201ENST00000556294 238 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC026464.5-201ENST00000562497 722 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 MIR5583-1-201ENST00000580941 59 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC020914.4-201ENST00000597690 277 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AC092747.3-201ENST00000603769 301 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 Z82243.1-201ENST00000609432 473 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 U2.17-201ENST00000611454 95 ntBASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.56□□□□□ -1.84
CTHRC1Q96CG8 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 SNORD113-7-201ENST00000363762 77 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 U3.12-201ENST00000364498 214 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 RNU6-831P-201ENST00000384548 107 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 RNU6-1127P-201ENST00000384580 107 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 SNORD70.1-201ENST00000391007 85 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 RPL7P10-201ENST00000417407 739 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 MRPL50P4-201ENST00000446432 475 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 RPS15AP27-201ENST00000449183 343 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 BTF3L4P4-201ENST00000506381 449 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 CCDC34P1-201ENST00000507441 517 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AC104136.1-201ENST00000512969 394 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 RNU6-189P-201ENST00000516120 101 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 SCARNA15.2-201ENST00000516409 127 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 RANP9-201ENST00000519957 271 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 OR11H5P-201ENST00000554039 926 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 HSPE1P5-201ENST00000561489 272 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AC034105.4-201ENST00000568304 277 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AC006270.2-201ENST00000578523 652 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 MIR4795-201ENST00000584182 89 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 SNORA62.6-201ENST00000606322 83 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AC103710.3-201ENST00000608157 948 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AL132765.2-201ENST00000610812 351 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AC104237.2-201ENST00000612456 443 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AL713922.2-201ENST00000619384 716 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 AC116096.1-201ENST00000566804 2314 ntBASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CTHRC1Q96CG8 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CTHRC1Q96CG8 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms