Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 AC098831.1-201ENST00000440661 216 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 RNA5SP385-201ENST00000515947 110 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 SNORA31.26-201ENST00000517250 137 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 AP003122.4-201ENST00000530980 758 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 H3F3AP1-201ENST00000559984 334 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 MIR3682-201ENST00000581338 84 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 MIR4506-201ENST00000584693 77 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 AC012493.2-201ENST00000595083 291 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SKA1Q96BD8 MIR3199-2-201ENST00000636243 86 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 AL356274.2-201ENST00000624379 3752 ntBASIC3.4□□□□□ -1.87
SKA1Q96BD8 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SKA1Q96BD8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SKA1Q96BD8 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SKA1Q96BD8 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 MIR301A-201ENST00000385261 86 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 SNORA26.8-201ENST00000391306 124 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AF228730.1-201ENST00000397972 663 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 RNU2-49P-201ENST00000410666 184 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 BX323014.1-201ENST00000412876 237 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AC096649.2-201ENST00000416186 393 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 AL353729.1-201ENST00000425044 720 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AL592045.1-201ENST00000429867 352 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AL591212.2-201ENST00000433923 257 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AC009296.1-201ENST00000443146 155 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 MTATP6P7-201ENST00000453315 681 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AC093899.1-201ENST00000457984 376 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 MTND3P7-201ENST00000474435 343 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AC126182.1-201ENST00000478134 357 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 MRPS36P2-201ENST00000512569 299 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 RNU1-143P-201ENST00000516296 146 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 U1.23-201ENST00000610293 146 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 RNU1-68P-201ENST00000615382 146 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 U1.39-201ENST00000621562 146 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 AC073476.4-201ENST00000628409 72 ntBASIC3.39□□□□□ -1.87
SKA1Q96BD8 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SKA1Q96BD8 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SKA1Q96BD8 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SKA1Q96BD8 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SKA1Q96BD8 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SKA1Q96BD8 RNU4-21P-201ENST00000362802 126 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 RNU6-946P-201ENST00000383878 107 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 RNU6-190P-201ENST00000384154 102 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 SNORA48.2-201ENST00000390926 124 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 RPL23AP32-201ENST00000395315 459 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 RNU4-47P-201ENST00000410876 114 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC023141.4-201ENST00000412031 328 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 AL356968.1-201ENST00000416622 474 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 SDCBPP3-201ENST00000419629 891 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 OR2AS1P-201ENST00000427827 319 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC104332.2-201ENST00000429959 156 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 snoU109.1-201ENST00000459339 135 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 RPL23AP67-201ENST00000465341 474 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 RPS15AP34-201ENST00000487776 387 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 RNU6-56P-201ENST00000516986 93 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 EMP1-206ENST00000537612 505 ntTSL 3 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC008088.1-201ENST00000580993 280 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC019159.1-201ENST00000605094 187 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC068276.1-201ENST00000605793 379 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 AP002360.4-201ENST00000606980 481 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC135507.2-201ENST00000612443 309 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 MIR7112-201ENST00000616126 65 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 AC026241.1-201ENST00000517873 2142 ntBASIC3.38□□□□□ -1.87
SKA1Q96BD8 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SKA1Q96BD8 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
SKA1Q96BD8 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms