Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 CPHL1P-201ENST00000461341 3407 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 MIR335-201ENST00000362173 94 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 MIR372-201ENST00000362225 67 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 Y_RNA.84-201ENST00000363011 104 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 RNU6-288P-201ENST00000363690 104 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 RNA5SP283-201ENST00000365604 119 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AC019155.1-201ENST00000382242 574 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 RNU6-187P-201ENST00000384139 106 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 MIR554-201ENST00000384874 96 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 RNU6-821P-201ENST00000390995 107 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 U3.35-201ENST00000408405 208 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 RNU6-603P-201ENST00000411403 107 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AP000275.1-201ENST00000411943 390 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AC092447.6-201ENST00000414578 210 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 CYP4F29P-201ENST00000420685 446 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 RPS15AP6-201ENST00000420703 385 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 RPL35AP21-201ENST00000437667 333 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 BX276092.4-201ENST00000452056 248 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 RN7SL542P-201ENST00000467147 294 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 RN7SL132P-201ENST00000478131 296 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AC087369.1-201ENST00000520775 996 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AP000859.1-201ENST00000525536 307 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AC233702.9-201ENST00000581528 203 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AC073410.2-201ENST00000603240 332 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNKSR1Q969H4 AC005183.1-201ENST00000603687 1979 ntBASIC5.55□□□□□ -1.52
CNKSR1Q969H4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 AC009229.4-201ENST00000623854 1947 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 MIR331-201ENST00000362302 94 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 RNU6-989P-201ENST00000362756 107 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 RNU4-44P-201ENST00000363050 141 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 SNORA62.3-201ENST00000365110 153 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 MIR670-201ENST00000390142 98 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 RNU6-817P-201ENST00000391083 104 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 SNORD58.1-201ENST00000391313 66 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 RNA5SP36-201ENST00000410197 133 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 RNU2-33P-201ENST00000410344 192 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 AC096920.1-201ENST00000423991 241 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 AC004938.1-201ENST00000438468 308 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 AL138752.1-201ENST00000452964 351 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 AC098869.1-201ENST00000481627 292 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 RNU4-71P-201ENST00000516258 113 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 AL713866.2-201ENST00000603579 219 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 MIR15A-201ENST00000607334 83 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 FP236240.3-201ENST00000623061 327 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 AC140479.6-201ENST00000633535 357 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 PCAT14-202ENST00000627127 3935 ntBASIC5.54□□□□□ -1.52
CNKSR1Q969H4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.54□□□□□ -1.52
CNKSR1Q969H4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.53□□□□□ -1.52
CNKSR1Q969H4 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNKSR1Q969H4 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CNKSR1Q969H4 AC104623.2-202ENST00000623477 4002 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 Y_RNA.464-201ENST00000384282 110 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 RNU6-130P-201ENST00000411112 103 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 RNU6-325P-201ENST00000411132 105 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 BX842559.1-201ENST00000419615 532 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 AC099336.2-201ENST00000422457 254 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 AL117339.2-201ENST00000430475 180 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 RPEP5-201ENST00000441137 268 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 AC099560.2-201ENST00000457554 255 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 RNA5SP103-201ENST00000459503 118 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNKSR1Q969H4 MTND3P25-201ENST00000509243 135 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 AC113155.1-201ENST00000511141 769 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 SNORA31.6-201ENST00000516241 130 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.53□□□□□ -1.52
CNKSR1Q969H4 MIR3133-201ENST00000583157 78 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC5.53□□□□□ -1.52
CNKSR1Q969H4 AC127459.3-201ENST00000624328 466 ntBASIC5.53□□□□□ -1.52
CNKSR1Q969H4 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CNKSR1Q969H4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.53□□□□□ -1.52
CNKSR1Q969H4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CNKSR1Q969H4 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNKSR1Q969H4 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms