Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SH3RF3Q8TEJ3 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 API5P2-201ENST00000397055 1498 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC007685.1-201ENST00000329806 452 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 Y_RNA.414-201ENST00000384011 101 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 RNU6-209P-201ENST00000384118 107 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 Y_RNA.574-201ENST00000384766 95 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 SSXP10-201ENST00000402595 565 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 CYP4F29P-201ENST00000420685 446 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AL138799.3-201ENST00000438968 350 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 TXNP1-201ENST00000441872 371 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 TRAPPC2P3-201ENST00000443200 321 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 PRPS1P1-201ENST00000445305 876 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 PRDX3P3-201ENST00000447765 522 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC104058.1-201ENST00000448028 297 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 BX276092.4-201ENST00000452056 248 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 HMGN3P1-201ENST00000453847 193 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 RPL37P6-202ENST00000464216 403 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AP000893.1-201ENST00000474462 794 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC110768.1-201ENST00000509222 400 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 VWA8P1-201ENST00000510889 176 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 SNORD27.1-201ENST00000516319 72 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 SNORA70.18-201ENST00000516696 98 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 RN7SKP277-201ENST00000516895 283 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 HSPE1P3-201ENST00000559254 309 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC121334.2-201ENST00000605387 271 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC022893.3-201ENST00000607665 437 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC107871.2-201ENST00000612894 502 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC007485.1-201ENST00000616755 206 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 uc_338.11-201ENST00000619132 160 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AL162373.1-201ENST00000620433 407 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AP000553.6-201ENST00000641242 118 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 AC004972.1-201ENST00000623934 2209 ntBASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.39□□□□□ -1.71
SH3RF3Q8TEJ3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 Y_RNA.153-201ENST00000363615 91 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 HLFP1-201ENST00000402375 499 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC002381.1-201ENST00000447049 280 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 MIR2053-201ENST00000459295 91 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC006512.1-201ENST00000468816 291 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC087385.1-201ENST00000475062 312 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC104564.1-201ENST00000493028 407 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 MRPS35P2-201ENST00000508242 191 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 RNU6-976P-201ENST00000516086 111 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 RN7SKP219-201ENST00000516825 296 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 RNA5SP337-201ENST00000517007 109 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC009812.2-201ENST00000517657 457 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AP005435.4-201ENST00000529514 284 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AL118558.2-201ENST00000556294 238 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 MIR4424-201ENST00000585257 86 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AF038458.1-201ENST00000588406 262 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC008687.2-201ENST00000597865 520 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 PRR13P7-201ENST00000605538 430 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC084757.4-201ENST00000616350 526 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC027290.2-201ENST00000623210 18662 ntBASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SH3RF3Q8TEJ3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
SH3RF3Q8TEJ3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.37□□□□□ -1.71
SH3RF3Q8TEJ3 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SH3RF3Q8TEJ3 AL157777.2-201ENST00000258070 137 ntBASIC4.37□□□□□ -1.71
SH3RF3Q8TEJ3 RPL23AP57-201ENST00000332361 466 ntBASIC4.37□□□□□ -1.71
SH3RF3Q8TEJ3 RNY4P16-201ENST00000364768 94 ntBASIC4.37□□□□□ -1.71
SH3RF3Q8TEJ3 Y_RNA.333-201ENST00000365274 102 ntBASIC4.37□□□□□ -1.71
SH3RF3Q8TEJ3 RNU6-444P-201ENST00000383988 108 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms