Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 AC135507.2-201ENST00000612443 309 ntBASIC4.12□□□□□ -1.75
SSH3Q8TE77 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.12□□□□□ -1.75
SSH3Q8TE77 AL354950.2-201ENST00000617939 290 ntBASIC4.12□□□□□ -1.75
SSH3Q8TE77 AC012314.7-201ENST00000619693 93 ntBASIC4.12□□□□□ -1.75
SSH3Q8TE77 SNORD39.4-201ENST00000620099 78 ntBASIC4.12□□□□□ -1.75
SSH3Q8TE77 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.12□□□□□ -1.75
SSH3Q8TE77 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.12□□□□□ -1.75
SSH3Q8TE77 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSH3Q8TE77 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSH3Q8TE77 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SSH3Q8TE77 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SSH3Q8TE77 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSH3Q8TE77 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSH3Q8TE77 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSH3Q8TE77 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSH3Q8TE77 SNORA63.1-201ENST00000362493 131 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 RNU6-1249P-201ENST00000363237 111 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 Y_RNA.255-201ENST00000364581 97 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 SNORD6-201ENST00000365444 73 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 RNY3P13-201ENST00000365542 102 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 Y_RNA.367-201ENST00000365544 101 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
SSH3Q8TE77 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SSH3Q8TE77 AC005326.1-201ENST00000429197 123 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 DDX3P2-201ENST00000446138 111 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 Z75741.1-201ENST00000446793 314 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 CEACAMP4-201ENST00000457676 421 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 SNORD121B-201ENST00000458838 81 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 AC010401.1-201ENST00000463867 348 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 AC010285.1-201ENST00000470580 392 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 AC106872.2-201ENST00000494303 480 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 EIF4EP3-201ENST00000498782 656 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 RPL38P4-201ENST00000502376 214 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 RNU6-1153P-201ENST00000516760 105 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.11□□□□□ -1.75
SSH3Q8TE77 SUB1P1-201ENST00000524415 382 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.11□□□□□ -1.75
SSH3Q8TE77 OR5BN1P-201ENST00000532955 829 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 VN1R80P-201ENST00000597126 338 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 AL034351.1-201ENST00000605288 668 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 AC244100.1-202ENST00000621554 382 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 AC100810.6-201ENST00000638068 285 ntBASIC4.11□□□□□ -1.75
SSH3Q8TE77 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SSH3Q8TE77 AL138713.1-201ENST00000624026 2130 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSH3Q8TE77 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 NACAP2-201ENST00000318548 624 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 RNU6-989P-201ENST00000362756 107 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 RNU5E-8P-201ENST00000363502 116 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 RNU6-996P-201ENST00000365438 107 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.1□□□□□ -1.75
SSH3Q8TE77 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 RNU6-39P-201ENST00000384344 107 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 RNVU1-14-201ENST00000384770 164 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 MIR184-201ENST00000384962 84 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AL356057.2-201ENST00000403318 432 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AL162578.1-201ENST00000406202 378 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 Z98941.1-201ENST00000407764 100 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 MIR1183-201ENST00000408856 89 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 RNA5SP31-201ENST00000411144 127 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 OR1AA1P-201ENST00000419597 916 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 MTCO3P46-201ENST00000425787 232 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 RAC1P7-201ENST00000445367 377 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AC007677.1-201ENST00000445757 515 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AC078785.3-201ENST00000476607 425 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 COX7A2P2-201ENST00000505291 250 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 SNORA31.20-201ENST00000517111 133 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 AL121603.1-201ENST00000553815 142 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 AC037471.2-201ENST00000564941 598 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 AC024220.1-201ENST00000603675 484 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AC064836.2-201ENST00000609491 462 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AC103710.2-201ENST00000609912 942 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AC245517.5-201ENST00000611529 162 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AL442067.2-201ENST00000614033 363 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AL590099.1-201ENST00000615276 138 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 AC005858.4-201ENST00000623191 700 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC4.1□□□□□ -1.75
SSH3Q8TE77 AF127577.6-201ENST00000623352 2191 ntBASIC4.1□□□□□ -1.75
SSH3Q8TE77 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SSH3Q8TE77 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
SSH3Q8TE77 Y_RNA.22-201ENST00000362492 102 ntBASIC4.09□□□□□ -1.75
SSH3Q8TE77 Y_RNA.460-201ENST00000384255 102 ntBASIC4.09□□□□□ -1.75
SSH3Q8TE77 SRIP2-201ENST00000428470 166 ntBASIC4.09□□□□□ -1.75
SSH3Q8TE77 AL365400.1-201ENST00000431854 640 ntBASIC4.09□□□□□ -1.75
SSH3Q8TE77 RPS20P5-201ENST00000434808 360 ntBASIC4.09□□□□□ -1.75
SSH3Q8TE77 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.09□□□□□ -1.75
SSH3Q8TE77 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.09□□□□□ -1.75
SSH3Q8TE77 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.09□□□□□ -1.75
SSH3Q8TE77 RPL7P12-201ENST00000446719 750 ntBASIC4.09□□□□□ -1.75
SSH3Q8TE77 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms