Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.84□□□□□ -2.11
LMX1AQ8TE12 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.84□□□□□ -2.11
LMX1AQ8TE12 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.84□□□□□ -2.11
LMX1AQ8TE12 AC121758.2-201ENST00000553271 193 ntBASIC1.84□□□□□ -2.11
LMX1AQ8TE12 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.84□□□□□ -2.11
LMX1AQ8TE12 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.84□□□□□ -2.11
LMX1AQ8TE12 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.84□□□□□ -2.11
LMX1AQ8TE12 AC013553.2-201ENST00000604244 589 ntBASIC1.84□□□□□ -2.11
LMX1AQ8TE12 RPL21P136-201ENST00000605378 396 ntBASIC1.84□□□□□ -2.11
LMX1AQ8TE12 AC024257.5-201ENST00000612739 531 ntBASIC1.84□□□□□ -2.11
LMX1AQ8TE12 AC084824.4-201ENST00000620106 731 ntBASIC1.84□□□□□ -2.11
LMX1AQ8TE12 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.84□□□□□ -2.11
LMX1AQ8TE12 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.84□□□□□ -2.11
LMX1AQ8TE12 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
LMX1AQ8TE12 CKAP2P1-201ENST00000555477 2049 ntBASIC1.84□□□□□ -2.12
LMX1AQ8TE12 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
LMX1AQ8TE12 CDR1-202ENST00000625883 1485 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 RNU4-51P-201ENST00000364206 140 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 snoZ40.1-201ENST00000364540 72 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 Y_RNA.408-201ENST00000383987 102 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 RNU2-42P-201ENST00000410697 113 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 TPMTP2-201ENST00000414372 726 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AL161449.1-201ENST00000414531 1199 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 MTATP6P27-201ENST00000416987 621 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 MTND4P3-201ENST00000417829 541 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 CBWD4P-201ENST00000445695 655 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 BMI1P1-201ENST00000445879 941 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 RPL7P12-201ENST00000446719 750 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC007182.2-201ENST00000489251 402 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 HMGB1P28-201ENST00000507778 552 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 RNU6-528P-201ENST00000516926 100 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC068135.2-201ENST00000569293 1028 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 MIR4658-201ENST00000584344 65 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC068620.3-201ENST00000602749 560 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AP000942.3-201ENST00000603702 160 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AL390208.1-201ENST00000605885 644 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC135507.1-201ENST00000607214 561 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC009237.15-201ENST00000610252 501 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC093838.1-201ENST00000613014 469 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AL449363.1-201ENST00000617815 186 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC002550.2-201ENST00000621246 394 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC084768.2-201ENST00000622736 221 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.83□□□□□ -2.12
LMX1AQ8TE12 AC009902.3-201ENST00000606235 2172 ntBASIC1.83□□□□□ -2.12
LMX1AQ8TE12 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AL161781.1-201ENST00000354277 403 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 SNORA38-201ENST00000363946 132 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 Y_RNA.338-201ENST00000365320 114 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 RNU4-52P-201ENST00000384209 138 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AL513331.1-201ENST00000411908 397 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC099548.1-201ENST00000421443 426 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 PPP1R11P2-201ENST00000423543 382 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 GTF2IP20-201ENST00000431663 360 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AL512844.2-201ENST00000433990 593 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 OFD1P7Y-201ENST00000454643 1155 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 RPL18AP17-201ENST00000455326 198 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 SNORD121B-201ENST00000458838 81 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC093677.1-201ENST00000514414 678 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 SCARNA15.2-201ENST00000516409 127 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 SNORA25.15-201ENST00000516487 89 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 BTF3P12-201ENST00000519620 469 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC022861.1-201ENST00000522981 663 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 SLC2A13P1-201ENST00000531560 322 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 RPS15AP11-201ENST00000594193 385 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 RPP40P2-201ENST00000603596 712 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC243773.3-201ENST00000613270 256 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC010678.1-201ENST00000614118 713 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC091834.1-201ENST00000614543 472 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC245884.12-201ENST00000615364 59 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC006213.4-201ENST00000616184 634 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AL357080.1-201ENST00000617394 239 ntBASIC1.82□□□□□ -2.12
LMX1AQ8TE12 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.82□□□□□ -2.12
LMX1AQ8TE12 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms