Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 RNU4-28P-201ENST00000364739 141 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 RNU6-1027P-201ENST00000383998 107 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 MIR19A-201ENST00000384878 82 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC119751.3-201ENST00000399720 670 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 TXNP7-201ENST00000406296 293 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AL451054.2-201ENST00000420896 202 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC099548.1-201ENST00000421443 426 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC092047.1-201ENST00000424997 240 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 MTND1P20-201ENST00000430341 950 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 RPL35AP22-201ENST00000436855 335 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 Y_RNA.638-201ENST00000459374 113 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC106872.3-201ENST00000495104 446 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC098799.2-201ENST00000509466 868 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 RAC1P5-201ENST00000512182 576 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 MTND5P4-201ENST00000514978 288 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC110760.3-202ENST00000515177 371 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 RNA5SP76-201ENST00000516277 87 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 RNU6-1282P-201ENST00000516735 96 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 MTCYBP20-201ENST00000524239 1129 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AP004247.1-201ENST00000531556 1289 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 TRAV28-201ENST00000557548 323 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AL133153.1-201ENST00000557756 303 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 MIR4999-201ENST00000585029 91 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC010133.1-201ENST00000615809 842 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC009159.1-201ENST00000618386 642 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AC002064.3-201ENST00000623448 346 ntBASIC2.02□□□□□ -2.09
LINC01560Q8TB33 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LINC01560Q8TB33 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 Y_RNA.302-201ENST00000364997 102 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 RPL21P75-201ENST00000396599 483 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 RPL21P28-201ENST00000401418 483 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AL592114.1-201ENST00000403842 483 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 CCNG1P1-201ENST00000406783 885 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 HMGN2P30-201ENST00000423237 256 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC007919.1-201ENST00000429380 217 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 HMGN2P3-201ENST00000433603 273 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 RPS15AP28-201ENST00000435088 386 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 HMGN2P5-201ENST00000436882 273 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AL714022.1-201ENST00000439897 151 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 Z82210.1-201ENST00000440037 231 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 RPL23AP58-201ENST00000440453 469 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 PIGFP3-201ENST00000441918 722 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 MTCO3P45-201ENST00000443036 613 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 MTATP6P30-201ENST00000443540 664 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 DDX3P2-201ENST00000446138 111 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 RPS29P12-201ENST00000460178 152 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 RPL21P39-201ENST00000463605 483 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC116337.2-201ENST00000477662 156 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 RPL21P93-201ENST00000480465 489 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC233702.1-201ENST00000482905 502 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC087190.1-201ENST00000484462 480 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 LINC00888-204ENST00000487386 421 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC093591.1-201ENST00000491435 481 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 RPL21P16-201ENST00000495531 483 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC008716.1-201ENST00000511084 513 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 RN7SKP265-201ENST00000516448 223 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 HMGN1P28-201ENST00000521340 364 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC090888.1-201ENST00000561335 1141 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AF038458.1-201ENST00000588406 262 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 U73023.1-201ENST00000603134 700 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 SDR42E1P2-201ENST00000614861 481 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AP000676.3-201ENST00000623299 569 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 AC110079.1-202ENST00000635213 138 ntBASIC2.01□□□□□ -2.09
LINC01560Q8TB33 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.01□□□□□ -2.09
LINC01560Q8TB33 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms