Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 MTCO3P1-205ENST00000422088 832 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 EIF4EP4-201ENST00000424916 578 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AL590383.1-201ENST00000428602 75 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AL356867.1-201ENST00000429623 299 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 IFNA20P-201ENST00000436840 528 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 RPL7P54-201ENST00000438336 674 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AL500527.1-201ENST00000448532 255 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 MRPS17P3-201ENST00000465453 385 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 RNA5SP182-201ENST00000516064 82 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 MIR3199-1-201ENST00000582434 88 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 RPP40P2-201ENST00000603596 712 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AP003973.1-201ENST00000604639 691 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 SDR42E1P2-201ENST00000614861 481 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 MIR6130-201ENST00000619419 109 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 SDR42E1P4-201ENST00000620894 481 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 AL118508.4-201ENST00000624142 1176 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 HPVC1-201ENST00000629899 1198 ntBASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.96□□□□□ -2.1
CCDC112Q8NEF3 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 RNU6-492P-201ENST00000363035 104 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 SUGT1P1-201ENST00000379514 476 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 U6.112-201ENST00000384129 70 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 U8.13-201ENST00000390842 128 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 MTND3P20-201ENST00000407663 186 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 DEFB130D-201ENST00000426866 237 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 MTCYBP32-201ENST00000427945 1084 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 BNIP3P2-201ENST00000441221 577 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 VN1R10P-201ENST00000447106 875 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 BOLA3P3-201ENST00000505182 232 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AC022483.1-201ENST00000514020 567 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 SNORA31.22-201ENST00000517204 135 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 SNORA31.25-201ENST00000517242 134 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AC009977.1-201ENST00000586015 570 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AL022067.1-201ENST00000602426 454 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AC012467.1-201ENST00000607740 256 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 U6.101-201ENST00000637707 76 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 OR4G2P-202ENST00000641004 1759 ntBASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CCDC112Q8NEF3 AL390862.1-201ENST00000635467 1469 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 RNA5SP99-201ENST00000364020 114 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 MIR514A1-201ENST00000385133 98 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AL592310.1-201ENST00000414330 671 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 LUZP4P1-201ENST00000415420 344 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AC007742.1-201ENST00000425789 329 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 ELOCP26-201ENST00000436067 329 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AL353718.1-201ENST00000451028 517 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 SUMO2P2-201ENST00000456482 255 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 RPL7P18-201ENST00000478965 734 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 RN7SKP219-201ENST00000516825 296 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 BNIP3P24-201ENST00000593398 557 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AC008121.1-201ENST00000603244 268 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AL096840.1-201ENST00000603287 93 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 MTND4LP5-201ENST00000605152 292 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AC093673.2-201ENST00000609674 331 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 AC008498.1-201ENST00000613012 531 ntBASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CCDC112Q8NEF3 MTCO1P9-201ENST00000505577 1534 ntBASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 RNU6-1066P-201ENST00000363573 105 ntBASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 RNU1-148P-201ENST00000384472 162 ntBASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 MIR218-1-201ENST00000384999 110 ntBASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 HMGB1P17-201ENST00000403495 628 ntBASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 AL356131.1-201ENST00000405826 414 ntBASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 PGBD4P6-201ENST00000421501 610 ntBASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 RPL31P63-201ENST00000422565 375 ntBASIC1.93□□□□□ -2.1
CCDC112Q8NEF3 RPS15AP5-201ENST00000436276 388 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms