Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 UBE2L2-201ENST00000254302 429 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 Y_RNA.112-201ENST00000363250 102 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 MIR659-201ENST00000384963 97 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 RNU6-328P-201ENST00000390887 106 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 SNORA3C-201ENST00000408792 125 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AC091390.3-201ENST00000426478 338 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AL592045.1-201ENST00000429867 352 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 HSPD1P21-201ENST00000436541 245 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AL359672.1-201ENST00000442302 409 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 HMGN2P21-201ENST00000447764 270 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 snoU13.24-201ENST00000458998 104 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 RPL35AP15-201ENST00000468042 339 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 MTND3P25-201ENST00000509243 135 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AC087854.1-201ENST00000519706 414 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 AC025423.5-201ENST00000550230 219 ntBASIC4.1□□□□□ -1.75
HIPK4Q8NE63 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
HIPK4Q8NE63 MARK2P15-201ENST00000432204 2186 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 DEFB108F-201ENST00000344638 222 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 SNORA58B-201ENST00000364259 136 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 Y_RNA.480-201ENST00000384364 102 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 RNU4-25P-201ENST00000410569 230 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC063979.1-201ENST00000415539 377 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 RBMY1KP-201ENST00000423480 476 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 HIGD1AP11-201ENST00000438361 280 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 RPS24P13-201ENST00000442520 397 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AL162591.2-201ENST00000449634 317 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AP000873.1-201ENST00000463987 400 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 RN7SL812P-201ENST00000493791 279 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 CEACAMP10-202ENST00000495431 496 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC026801.1-201ENST00000497178 464 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC026782.1-201ENST00000512952 449 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 MAL2-206ENST00000522187 547 ntTSL 4 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 MED28P6-201ENST00000558776 231 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 MIR5692A1-201ENST00000580523 69 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC007448.1-201ENST00000582714 234 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 MIR548AC-201ENST00000585049 88 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC025946.2-201ENST00000603398 234 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AP000654.2-201ENST00000605633 586 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 ATP5A1P2-202ENST00000616464 443 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 Z99571.1-201ENST00000636677 394 ntBASIC4.09□□□□□ -1.75
HIPK4Q8NE63 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.09□□□□□ -1.75
HIPK4Q8NE63 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HIPK4Q8NE63 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
HIPK4Q8NE63 AC138393.1-203ENST00000327086 343 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 RNU6-1115P-201ENST00000362490 106 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 Y_RNA.28-201ENST00000362554 111 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 SNORD3E-201ENST00000362899 217 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 Y_RNA.145-201ENST00000363527 102 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
HIPK4Q8NE63 RN7SKP106-201ENST00000410832 272 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HIPK4Q8NE63 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.08□□□□□ -1.76
HIPK4Q8NE63 TXNP1-201ENST00000441872 371 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
HIPK4Q8NE63 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HIPK4Q8NE63 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.08□□□□□ -1.76
HIPK4Q8NE63 MIR2053-201ENST00000459295 91 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 RPL7P5-201ENST00000471472 736 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 RPL31P60-201ENST00000478450 367 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 AC097473.1-201ENST00000508142 408 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 CDH12P4-201ENST00000517835 295 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 CDH12P3-201ENST00000517935 295 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 CDH12P1-201ENST00000518435 295 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
HIPK4Q8NE63 AC087369.1-201ENST00000520775 996 ntBASIC4.08□□□□□ -1.76
HIPK4Q8NE63 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
HIPK4Q8NE63 AP000827.1-201ENST00000527814 258 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms