Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 RNU1-108P-201ENST00000362556 161 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 RNU1-44P-201ENST00000384453 163 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 MTND4P28-201ENST00000426217 387 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 SNRPEP9-201ENST00000436794 238 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AL133547.1-201ENST00000448546 220 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 SNORA14.1-201ENST00000516113 141 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 IGLV3-26-201ENST00000520756 302 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AC025755.1-201ENST00000521306 278 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AC006064.5-201ENST00000541782 248 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 MIR3942-201ENST00000585264 109 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AL356055.1-201ENST00000602528 446 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AC136601.2-201ENST00000604356 474 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AC104237.2-201ENST00000612456 443 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AL031601.2-202ENST00000622650 282 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AC099506.2-201ENST00000623074 221 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 CUL1P1-201ENST00000509510 2425 ntBASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
SYNPOQ8N3V7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 Y_RNA.167-201ENST00000363735 109 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 SNORA70.4-201ENST00000365509 134 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AC073063.1-201ENST00000434352 607 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 RPL23AP89-201ENST00000439324 255 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 RPS26P28-201ENST00000470806 348 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AC084357.1-201ENST00000473404 255 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AL135752.1-201ENST00000479477 471 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 HMGB1P30-201ENST00000492455 606 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AC022493.1-201ENST00000492984 337 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AC008716.1-201ENST00000511084 513 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AC011611.1-201ENST00000552179 197 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 MTND6P33-201ENST00000571794 183 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 NUTF2P8-201ENST00000604593 363 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AC008962.1-201ENST00000605729 304 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 Z98200.1-201ENST00000607298 470 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 uc_338.15-201ENST00000615470 191 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 CR392039.5-201ENST00000623201 510 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AL133216.2-202ENST00000634512 349 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 U6.99-201ENST00000637524 83 ntBASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SYNPOQ8N3V7 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AC090740.1-201ENST00000623193 2262 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 RNU4-73P-201ENST00000363164 141 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 Y_RNA.184-201ENST00000363884 108 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 RNU6-266P-201ENST00000364225 107 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 RPL23AP48-201ENST00000406913 488 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 EIF4EP1-201ENST00000422311 642 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 TOMM20P4-201ENST00000427861 435 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 HMGB1P18-201ENST00000438801 619 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AC133473.1-201ENST00000455173 299 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AC104472.2-201ENST00000469035 601 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 TRBVA-201ENST00000498804 316 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 Y_RNA.682-201ENST00000516457 100 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AC105029.1-201ENST00000520250 669 ntBASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC4.25□□□□□ -1.73
SYNPOQ8N3V7 AC039056.2-201ENST00000622261 511 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms