Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 U1.23-201ENST00000610293 146 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AL157817.1-201ENST00000614264 790 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 AC083809.1-201ENST00000615051 472 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 RNU1-68P-201ENST00000615382 146 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 U1.39-201ENST00000621562 146 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 U6.99-201ENST00000637524 83 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 OR8B1P-202ENST00000641132 1178 ntBASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LINC01561Q8N1V8 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 RNU5E-1-201ENST00000362477 120 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 RNY1P12-201ENST00000364251 105 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 RNU6-19P-201ENST00000384718 107 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 SNORA40C-201ENST00000391285 128 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 RPS3AP36-201ENST00000398190 775 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AL035423.1-201ENST00000420331 213 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 PTGES3P4-201ENST00000426243 356 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 RPL23AP30-201ENST00000432419 501 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 ATP5C1P1-201ENST00000441945 895 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 MTND6P13-201ENST00000443510 523 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 EEF1B2P7-201ENST00000451177 676 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 ELOCP23-201ENST00000452014 332 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AL441985.1-201ENST00000457727 251 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 snoU109.1-201ENST00000459339 135 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 snoU13.22-201ENST00000459428 104 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 RN7SL499P-201ENST00000481141 276 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 SCARNA20.6-201ENST00000517251 106 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 HMGB1P41-201ENST00000520234 440 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AL121821.2-201ENST00000556081 394 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 CYCSP39-201ENST00000565821 309 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 ROCK1P1-201ENST00000573767 549 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 MIR3915-201ENST00000578518 97 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 NRBF2P1-201ENST00000587407 859 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AL022154.1-201ENST00000604698 785 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AC091304.9-201ENST00000612091 226 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 ZYXP1-201ENST00000617638 118 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 MTND5P19-201ENST00000424872 1794 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 AC093831.2-201ENST00000624393 3427 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 MTND4P27-201ENST00000450813 1354 ntBASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
LINC01561Q8N1V8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 AC080128.1-201ENST00000474389 1917 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 GNG5P1-201ENST00000255500 204 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 Y_RNA.33-201ENST00000362591 102 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 RPL19P1-201ENST00000411635 428 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 AL078601.1-201ENST00000444542 271 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 UQCRHP3-201ENST00000451503 251 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 MTCO2P6-201ENST00000463134 685 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 RPS3AP43-201ENST00000479743 781 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 RPL21P13-201ENST00000488305 481 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 AC026979.1-201ENST00000492525 396 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 AC104619.4-201ENST00000510773 249 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 SNORA70.18-201ENST00000516696 98 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 RNU6-572P-201ENST00000516724 80 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 DUXAP5-201ENST00000529668 529 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 LINC00933-203ENST00000559812 219 ntBASIC2.21□□□□□ -2.06
LINC01561Q8N1V8 AC093536.2-201ENST00000565257 1406 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms