Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 AC131971.1-201ENST00000332881 1482 ntBASIC3.45□□□□□ -1.86
CCDC28AQ8IWP9 AP004289.2-201ENST00000444413 1457 ntBASIC3.45□□□□□ -1.86
CCDC28AQ8IWP9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC3.45□□□□□ -1.86
CCDC28AQ8IWP9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC28AQ8IWP9 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC28AQ8IWP9 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 PWAR6-201ENST00000552334 4618 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 MIR412-201ENST00000362142 91 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 Y_RNA.480-201ENST00000384364 102 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 Y_RNA.530-201ENST00000384587 101 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 MIR888-201ENST00000401186 77 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 RPL23AP52-201ENST00000439311 478 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 PMCHL2-203ENST00000457791 237 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC006463.2-201ENST00000473326 348 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 RPL21P13-201ENST00000488305 481 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC139453.3-201ENST00000493276 369 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 RPL36AP41-201ENST00000493820 306 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC008953.1-201ENST00000497334 318 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC025755.1-201ENST00000521306 278 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC008033.2-201ENST00000542626 177 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 TRAV37-201ENST00000553906 342 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 GNRHR2P1-201ENST00000555315 631 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC044860.2-201ENST00000561005 179 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 BNIP3P25-201ENST00000596023 559 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC007938.3-201ENST00000604965 623 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AL138880.2-201ENST00000616214 239 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC073308.1-201ENST00000623696 305 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC007496.3-201ENST00000624987 3443 ntBASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC28AQ8IWP9 AC125257.1-201ENST00000560400 2930 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 CBX3P1-201ENST00000325243 554 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 Y_RNA.167-201ENST00000363735 109 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 SNORA75B-201ENST00000384053 137 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 RNU6-767P-201ENST00000384132 107 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 EIF4E2P1-201ENST00000393781 255 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 RPL32P23-201ENST00000397237 405 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 RPLP0P7-201ENST00000416050 667 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 AL353621.1-201ENST00000418219 243 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 USP9YP20-201ENST00000419224 558 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 RPL17P36-201ENST00000420302 549 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 AL645937.1-202ENST00000421799 937 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 HMGN2P30-201ENST00000423237 256 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 AC016831.4-201ENST00000438302 307 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 BRK1P2-201ENST00000442875 223 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 RPL7P12-201ENST00000446719 750 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 RPL35AP28-201ENST00000459730 331 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 RPS27P29-201ENST00000463110 252 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 AC083904.1-201ENST00000487828 231 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 MTND3P25-201ENST00000509243 135 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 FAM206BP-201ENST00000510179 541 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 BTF3P13-201ENST00000513224 490 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 BTF3P12-201ENST00000519620 469 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 LRRC37A5P-203ENST00000580181 585 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 MIR3667-201ENST00000581025 74 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 AC006111.3-201ENST00000622137 383 ntBASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC28AQ8IWP9 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC28AQ8IWP9 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC28AQ8IWP9 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC28AQ8IWP9 RNU6-270P-201ENST00000364131 105 ntBASIC3.42□□□□□ -1.86
CCDC28AQ8IWP9 RNU5E-4P-201ENST00000364931 120 ntBASIC3.42□□□□□ -1.86
CCDC28AQ8IWP9 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC28AQ8IWP9 SNORA32.2-201ENST00000384049 122 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms