Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.15□□□□□ -1.91
APLFQ8IW19 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
APLFQ8IW19 RNU6-1178P-201ENST00000516674 107 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 Vault.3-201ENST00000516676 95 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 RNU6-56P-201ENST00000516986 93 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.15□□□□□ -1.91
APLFQ8IW19 AC090136.1-201ENST00000520009 240 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 AC107934.1-201ENST00000522215 217 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 OR4R3P-201ENST00000525084 838 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 FAM92A1P1-201ENST00000528023 890 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.15□□□□□ -1.91
APLFQ8IW19 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.15□□□□□ -1.91
APLFQ8IW19 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.15□□□□□ -1.91
APLFQ8IW19 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.15□□□□□ -1.91
APLFQ8IW19 MIR3118-1-201ENST00000581787 76 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 MIR4298-201ENST00000584380 73 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.15□□□□□ -1.91
APLFQ8IW19 AC073657.2-201ENST00000605661 303 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 AC092954.2-201ENST00000609103 430 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 U73479.1-201ENST00000618062 168 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 AL359880.1-201ENST00000621879 266 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 AL159972.1-201ENST00000625150 448 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.15□□□□□ -1.91
APLFQ8IW19 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.15□□□□□ -1.91
APLFQ8IW19 AC009902.3-201ENST00000606235 2172 ntBASIC3.15□□□□□ -1.91
APLFQ8IW19 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
APLFQ8IW19 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APLFQ8IW19 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.14□□□□□ -1.91
APLFQ8IW19 MTCO1P24-201ENST00000515438 1558 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APLFQ8IW19 RNU4-1-201ENST00000363925 141 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 RNA5SP189-201ENST00000364920 115 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 Y_RNA.372-201ENST00000365599 102 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
APLFQ8IW19 CALM2P3-201ENST00000400429 449 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AL590002.1-201ENST00000406554 418 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 RNA5SP56-201ENST00000410277 118 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.14□□□□□ -1.91
APLFQ8IW19 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.14□□□□□ -1.91
APLFQ8IW19 AC006548.1-201ENST00000427470 102 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC3.14□□□□□ -1.91
APLFQ8IW19 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APLFQ8IW19 AC002486.1-201ENST00000435098 391 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 RBMX2P4-201ENST00000441256 376 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 MTATP6P30-201ENST00000443540 664 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 MTND4P18-201ENST00000447010 465 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
APLFQ8IW19 FGF7P6-202ENST00000451282 293 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.14□□□□□ -1.91
APLFQ8IW19 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.14□□□□□ -1.91
APLFQ8IW19 AC013267.1-201ENST00000458227 267 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AC008571.1-201ENST00000467232 300 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AL121769.1-201ENST00000469473 401 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AP004217.1-201ENST00000480579 346 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AC010587.1-201ENST00000505809 469 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 PTGES3P3-201ENST00000511479 482 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AP001893.2-201ENST00000526949 202 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.14□□□□□ -1.91
APLFQ8IW19 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.14□□□□□ -1.91
APLFQ8IW19 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.14□□□□□ -1.91
APLFQ8IW19 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.14□□□□□ -1.91
APLFQ8IW19 AC067852.3-201ENST00000589177 561 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 RNA5SP108-201ENST00000605921 117 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 AC002550.2-201ENST00000621246 394 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 CR381572.1-201ENST00000625098 102 ntBASIC3.14□□□□□ -1.91
APLFQ8IW19 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.14□□□□□ -1.91
APLFQ8IW19 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.14□□□□□ -1.91
APLFQ8IW19 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
APLFQ8IW19 AL157700.1-201ENST00000561973 1432 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 OR5J1P-201ENST00000313544 939 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
APLFQ8IW19 Y_RNA.1-201ENST00000352915 104 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 RNU6-282P-201ENST00000365357 103 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
APLFQ8IW19 RNU6-356P-201ENST00000384140 107 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
APLFQ8IW19 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
APLFQ8IW19 RNU2-47P-201ENST00000410649 186 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 RNU4-78P-201ENST00000410940 126 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 Z99755.1-201ENST00000414048 380 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 RPS15AP12-201ENST00000419498 388 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 AL353678.1-201ENST00000422735 741 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.13□□□□□ -1.91
APLFQ8IW19 MTND1P2-201ENST00000430604 821 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 MTCO2P11-201ENST00000431069 680 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 HMGN2P20-201ENST00000437531 273 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 CST9LP2-201ENST00000437612 320 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.13□□□□□ -1.91
APLFQ8IW19 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.13□□□□□ -1.91
APLFQ8IW19 SNORD121B-201ENST00000458838 81 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 AC109925.1-201ENST00000478069 331 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 AC007182.2-201ENST00000489251 402 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.13□□□□□ -1.91
APLFQ8IW19 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.13□□□□□ -1.91
APLFQ8IW19 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.13□□□□□ -1.91
APLFQ8IW19 AC017037.2-201ENST00000513850 890 ntBASIC3.13□□□□□ -1.91
APLFQ8IW19 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.13□□□□□ -1.91
APLFQ8IW19 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms