Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC135628.1-201ENST00000568867 534 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC010653.1-201ENST00000571108 881 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AL035413.2-201ENST00000604801 525 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC138749.5-201ENST00000611461 208 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC116165.2-201ENST00000616705 206 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 UCA1.1-201ENST00000620952 75 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC099506.2-201ENST00000623074 221 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC078883.4-201ENST00000623218 367 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC002064.3-201ENST00000623448 346 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 GABRG2-229ENST00000641017 3628 ntBASIC3.18□□□□□ -1.9
PRPF39Q86UA1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PRPF39Q86UA1 MTND5P19-201ENST00000424872 1794 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF39Q86UA1 RNU6-288P-201ENST00000363690 104 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF39Q86UA1 COTL1P1-201ENST00000422309 375 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF39Q86UA1 USP9YP15-201ENST00000442391 422 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 NANOGNBP1-201ENST00000448444 480 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 AP001486.1-201ENST00000463339 476 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 RPS26P21-201ENST00000475397 348 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 AL049873.1-201ENST00000480540 376 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 RPL36AP51-201ENST00000487216 318 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 RPS29P20-201ENST00000489592 171 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 AC105252.1-201ENST00000503089 286 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF39Q86UA1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.17□□□□□ -1.9
PRPF39Q86UA1 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.17□□□□□ -1.9
PRPF39Q86UA1 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.17□□□□□ -1.9
PRPF39Q86UA1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF39Q86UA1 LARP7P3-201ENST00000579888 337 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 UBL5P2-201ENST00000583788 219 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 BNIP3P8-201ENST00000597863 560 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 AC012065.4-201ENST00000602445 679 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 DUXAP4-201ENST00000603046 613 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 AC092140.2-201ENST00000618027 521 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 AC097520.1-201ENST00000624435 385 ntBASIC3.17□□□□□ -1.9
PRPF39Q86UA1 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PRPF39Q86UA1 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
PRPF39Q86UA1 SNORD15B-201ENST00000384714 146 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 RPL35AP12-201ENST00000425362 338 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AL365496.1-201ENST00000426885 215 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AC009414.1-201ENST00000427200 443 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AC009296.1-201ENST00000443146 155 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 RPS15AP27-201ENST00000449183 343 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 FABP5P5-201ENST00000515537 406 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 RNU1-103P-201ENST00000516502 125 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 RNU7-51P-201ENST00000516560 62 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 RN7SKP282-201ENST00000516824 299 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 RNU6-1092P-201ENST00000516955 87 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 RNA5SP337-201ENST00000517007 109 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 RPS3AP4-201ENST00000555161 764 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 H3F3AP1-201ENST00000559984 334 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AC104763.2-201ENST00000604179 382 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AC007363.1-201ENST00000604736 620 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AC004832.5-201ENST00000608677 401 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 MIR622-201ENST00000638396 96 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 AC092435.3-201ENST00000565538 3654 ntBASIC3.16□□□□□ -1.9
PRPF39Q86UA1 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PRPF39Q86UA1 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PRPF39Q86UA1 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.15□□□□□ -1.91
PRPF39Q86UA1 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PRPF39Q86UA1 RNU6-511P-201ENST00000363496 107 ntBASIC3.15□□□□□ -1.91
PRPF39Q86UA1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
PRPF39Q86UA1 RNU2-8P-201ENST00000410727 190 ntBASIC3.15□□□□□ -1.91
PRPF39Q86UA1 ELOCP4-201ENST00000420090 333 ntBASIC3.15□□□□□ -1.91
PRPF39Q86UA1 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.15□□□□□ -1.91
PRPF39Q86UA1 AL589872.1-201ENST00000426602 288 ntBASIC3.15□□□□□ -1.91
PRPF39Q86UA1 AC093106.2-201ENST00000428212 385 ntBASIC3.15□□□□□ -1.91
PRPF39Q86UA1 MTATP6P17-201ENST00000431030 672 ntBASIC3.15□□□□□ -1.91
PRPF39Q86UA1 RPL37P4-201ENST00000448908 268 ntBASIC3.15□□□□□ -1.91
PRPF39Q86UA1 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.15□□□□□ -1.91
PRPF39Q86UA1 MTND3P7-201ENST00000474435 343 ntBASIC3.15□□□□□ -1.91
PRPF39Q86UA1 BET1P1-201ENST00000482276 359 ntBASIC3.15□□□□□ -1.91
PRPF39Q86UA1 AC118465.1-201ENST00000513820 1271 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms