Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNU6-98P-201ENST00000384173 107 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AL031679.1-201ENST00000400616 525 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC00643Q86TS7 UBE2V2P3-201ENST00000433562 437 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 MTND4LP10-201ENST00000435146 291 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AL049734.2-201ENST00000441066 616 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 RPS4XP11-201ENST00000446897 772 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AC017099.1-201ENST00000448261 1028 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 snoU13.9-201ENST00000458927 103 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 CENPUP1-201ENST00000526649 1202 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC00643Q86TS7 OR4P1P-201ENST00000530808 1136 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 TRAV11-201ENST00000539512 339 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AL442163.2-201ENST00000553912 710 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AL049870.4-201ENST00000555741 486 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC0.55□□□□□ -2.32
LINC00643Q86TS7 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AC079148.1-201ENST00000565944 819 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AC008945.2-201ENST00000606056 604 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC0.55□□□□□ -2.32
LINC00643Q86TS7 MIR7106-201ENST00000612419 65 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AC091834.1-201ENST00000614543 472 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AL118508.4-201ENST00000624142 1176 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 AC090517.3-201ENST00000625170 141 ntBASIC0.55□□□□□ -2.32
LINC00643Q86TS7 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
LINC00643Q86TS7 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
LINC00643Q86TS7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
LINC00643Q86TS7 RNU6-661P-201ENST00000362409 107 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 RNU4-38P-201ENST00000364472 129 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
LINC00643Q86TS7 RNU6-26P-201ENST00000383985 107 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC0.54□□□□□ -2.32
LINC00643Q86TS7 FABP12P1-201ENST00000401911 322 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC006461.1-201ENST00000412637 326 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.54□□□□□ -2.32
LINC00643Q86TS7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC112492.4-201ENST00000456549 352 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC104629.2-201ENST00000468627 598 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 RNU6-351P-201ENST00000516097 100 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC106734.1-201ENST00000568646 663 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC026271.5-201ENST00000577873 130 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AL020996.3-201ENST00000606617 222 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 BX323046.1-201ENST00000610145 535 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC106800.4-201ENST00000614905 153 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 MIR8074-201ENST00000615081 81 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC108479.2-201ENST00000617314 601 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC024581.2-201ENST00000619986 252 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC090772.4-201ENST00000623599 362 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC110994.2-201ENST00000635481 492 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AC104454.1-201ENST00000421341 1401 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.54□□□□□ -2.32
LINC00643Q86TS7 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC0.54□□□□□ -2.32
LINC00643Q86TS7 ZNF209P-201ENST00000593450 2304 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC0.53□□□□□ -2.32
LINC00643Q86TS7 RNU6-271P-201ENST00000363858 105 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.53□□□□□ -2.32
LINC00643Q86TS7 RNU6-730P-201ENST00000383954 104 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 MIR1283-2-201ENST00000408621 87 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 MIR1303-201ENST00000408625 86 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 PIGFP2-201ENST00000421400 651 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AC006946.1-201ENST00000429106 328 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.53□□□□□ -2.32
LINC00643Q86TS7 SNORA84-201ENST00000459229 133 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AL121594.1-201ENST00000475906 575 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 HSPE1P6-201ENST00000479457 291 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AL359212.1-201ENST00000556608 614 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AC093510.2-201ENST00000562820 896 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.53□□□□□ -2.32
LINC00643Q86TS7 MIR4765-201ENST00000585007 77 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 MIR4653-201ENST00000585107 83 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AC105224.1-201ENST00000587055 421 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AC008739.3-201ENST00000603262 127 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AC211469.2-201ENST00000605461 205 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 AL137246.1-201ENST00000607072 977 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC0.53□□□□□ -2.32
LINC00643Q86TS7 U1.36-201ENST00000620684 176 ntBASIC0.53□□□□□ -2.32
LINC00643Q86TS7 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
LINC00643Q86TS7 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
LINC00643Q86TS7 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
LINC00643Q86TS7 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC0.53□□□□□ -2.33
LINC00643Q86TS7 MIR449A-201ENST00000362113 91 ntBASIC0.52□□□□□ -2.33
LINC00643Q86TS7 RNA5SP465-201ENST00000391195 109 ntBASIC0.52□□□□□ -2.33
LINC00643Q86TS7 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
LINC00643Q86TS7 AC013410.2-201ENST00000422627 201 ntBASIC0.52□□□□□ -2.33
LINC00643Q86TS7 AL590383.1-201ENST00000428602 75 ntBASIC0.52□□□□□ -2.33
LINC00643Q86TS7 AC012497.1-201ENST00000429392 575 ntBASIC0.52□□□□□ -2.33
LINC00643Q86TS7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC0.52□□□□□ -2.33
LINC00643Q86TS7 PABPC1P3-201ENST00000469174 459 ntBASIC0.52□□□□□ -2.33
LINC00643Q86TS7 RPS15AP17-201ENST00000470598 390 ntBASIC0.52□□□□□ -2.33
LINC00643Q86TS7 AC079140.2-201ENST00000506193 142 ntBASIC0.52□□□□□ -2.33
LINC00643Q86TS7 AC114781.4-201ENST00000513707 639 ntBASIC0.52□□□□□ -2.33
LINC00643Q86TS7 AC117532.1-201ENST00000514638 323 ntBASIC0.52□□□□□ -2.33
LINC00643Q86TS7 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms