Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 RNU6-406P-201ENST00000516470 107 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC009314.1-201ENST00000603871 304 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC009779.6-201ENST00000603972 165 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 AC000123.3-201ENST00000624029 4975 ntBASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
UBE3DQ7Z6J8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 DEFB108F-201ENST00000344638 222 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 RNA5SP87-201ENST00000384155 118 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 MIR548M-201ENST00000408260 86 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 MIR1271-201ENST00000408537 86 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 U3.42-201ENST00000408746 214 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 RAC1P3-201ENST00000416129 580 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AL158156.1-201ENST00000422509 473 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 MTCO1P39-201ENST00000426148 480 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AL159987.2-201ENST00000432754 307 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AL589765.3-201ENST00000446084 462 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AL359073.1-201ENST00000448036 403 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AL591623.2-201ENST00000449978 222 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 RPS20P22-201ENST00000473700 357 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AC110792.1-201ENST00000491826 472 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 RPS23P5-201ENST00000495419 428 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 OR51K1P-201ENST00000510214 950 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 RNU6-570P-201ENST00000517051 105 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 RNU6-789P-201ENST00000517105 102 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AC068446.3-201ENST00000555285 382 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AC012433.1-201ENST00000588916 398 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AL161798.1-201ENST00000604630 131 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AC024940.4-201ENST00000605507 246 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 MIR6853-201ENST00000619642 74 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 SDAD1P1-202ENST00000524156 2051 ntBASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
UBE3DQ7Z6J8 AP000560.1-201ENST00000624150 1937 ntBASIC4.46□□□□□ -1.69
UBE3DQ7Z6J8 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
UBE3DQ7Z6J8 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.46□□□□□ -1.69
UBE3DQ7Z6J8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 MIR521-1-201ENST00000384902 87 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 LAP3P1-201ENST00000403648 294 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-1025P-201ENST00000410629 104 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 SNORD56-201ENST00000413522 71 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 BX510359.2-201ENST00000417920 305 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 TOMM20P4-201ENST00000427861 435 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 C4BPAP2-201ENST00000428434 478 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 AC087650.1-201ENST00000431445 468 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 RN7SKP210-201ENST00000459176 261 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 GZMAP1-201ENST00000503054 631 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 HMGB1P35-201ENST00000503360 598 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 RNU5B-3P-201ENST00000516601 115 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 RNA5SP471-201ENST00000516971 106 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 RNU6-111P-201ENST00000517179 105 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 IGKV2D-23-201ENST00000518179 286 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 AL110118.1-201ENST00000553543 400 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 AL137100.2-201ENST00000555786 315 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 AC015912.2-201ENST00000571053 181 ntBASIC4.46□□□□□ -1.7
UBE3DQ7Z6J8 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 163.8 ms