Protein–RNA interactions for Protein: Q6ZNE9

RUFY4, RUN and FYVE domain-containing protein 4, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY4Q6ZNE9 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 DEFB108F-201ENST00000344638 222 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 RNU1-15P-201ENST00000353977 144 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 SNORD74.4-201ENST00000364129 80 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-335P-201ENST00000364563 113 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 SNORA62.3-201ENST00000365110 153 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 Y_RNA.445-201ENST00000384168 102 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 MIR554-201ENST00000384874 96 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 FGF7P3-201ENST00000454645 303 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AL592156.1-201ENST00000508758 304 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AC093303.1-201ENST00000514549 295 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AC087854.1-201ENST00000519706 414 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 MIR4429-201ENST00000580105 73 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AL139395.1-201ENST00000603662 160 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AP001836.1-201ENST00000604675 523 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 HMGN2P28-201ENST00000606102 262 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.71□□□□□ -1.66
RUFY4Q6ZNE9 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 RLIMP1-201ENST00000339626 1680 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AC018529.3-201ENST00000624212 2254 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AL136964.1-201ENST00000622038 2990 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-288P-201ENST00000363690 104 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-45P-201ENST00000384471 107 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-601P-201ENST00000384540 107 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-1160P-201ENST00000384546 104 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 MIR513A2-201ENST00000385249 127 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 RNU6-328P-201ENST00000390887 106 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AL162151.2-201ENST00000448875 158 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AC034236.1-201ENST00000469891 373 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AL163540.1-201ENST00000485382 386 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AC026801.1-201ENST00000497178 464 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 MLLT10P2-201ENST00000506434 249 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 MTCYBP40-201ENST00000509390 1135 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 RNA5SP73-201ENST00000516744 108 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 RPL23AP97-201ENST00000568955 471 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AC100830.2-201ENST00000581636 240 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 MIR15A-201ENST00000607334 83 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AL157817.1-201ENST00000614264 790 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AC067931.1-201ENST00000624190 671 ntBASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
RUFY4Q6ZNE9 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 RNU5A-1-201ENST00000362698 116 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 RNA5SP235-201ENST00000365411 114 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 SNORA33.2-201ENST00000365413 134 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 AL139039.1-201ENST00000401900 692 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 RPL21P65-201ENST00000406094 466 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 MIR1911-201ENST00000410783 80 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 BX842559.1-201ENST00000419615 532 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 RPL23AP81-201ENST00000455252 467 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 RPL21P41-201ENST00000459863 264 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 RN7SL132P-201ENST00000478131 296 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 AF213884.1-201ENST00000488102 463 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 AC022634.1-201ENST00000520765 532 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 SNRPGP18-201ENST00000553000 214 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 AC005951.2-201ENST00000576282 495 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 FAM60BP-201ENST00000578364 658 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 MIR4286-201ENST00000580651 93 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 AC006130.2-201ENST00000586202 326 ntBASIC4.69□□□□□ -1.66
RUFY4Q6ZNE9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 209.6 ms