Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 FO393415.2-201ENST00000480085 343 ntBASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 APOOP3-201ENST00000536787 586 ntBASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 MGST1-215ENST00000540056 546 ntTSL 3 BASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 DPRXP5-201ENST00000604662 539 ntBASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 AC093838.1-201ENST00000613014 469 ntBASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 SDR42E1P2-201ENST00000614861 481 ntBASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 AC092140.2-201ENST00000618027 521 ntBASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 AL162373.1-201ENST00000620433 407 ntBASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 SDR42E1P4-201ENST00000620894 481 ntBASIC0.79□□□□□ -2.28
CSPG4Q6UVK1 RPS4XP3-201ENST00000398541 413 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 RNU4-65P-201ENST00000410473 140 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 COX6CP18-201ENST00000448769 222 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AL513343.1-201ENST00000451818 792 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 CASP1P1-201ENST00000526345 212 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AC107954.1-201ENST00000565906 727 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AC009090.3-201ENST00000616553 565 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AC126177.8-201ENST00000618339 1015 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AC011330.2-201ENST00000621680 635 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 MIR6759-201ENST00000638110 65 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 RNU6-600P-201ENST00000362524 99 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 RNU6-288P-201ENST00000363690 104 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 TXNP7-201ENST00000406296 293 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 Z86062.1-201ENST00000406773 777 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AC244636.1-201ENST00000421152 228 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 ARL2BPP3-201ENST00000421226 480 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 HMGN2P10-201ENST00000448085 265 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 KLRA1P-201ENST00000503499 986 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AC104806.1-201ENST00000508720 308 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 RN7SKP277-201ENST00000516895 283 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 NDUFS5P6-201ENST00000529136 295 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AC069304.3-201ENST00000603938 1084 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 AC087588.2-201ENST00000617667 426 ntBASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.78□□□□□ -2.28
CSPG4Q6UVK1 SDAD1P2-201ENST00000441308 2028 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 RNA5SP331-201ENST00000364986 107 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 HMGB3P31-201ENST00000413333 595 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 OR51A5P-201ENST00000415429 942 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 MTND5P25-201ENST00000430499 799 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 RPL23AP33-201ENST00000442301 452 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 SNORD97-201ENST00000459187 142 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 RNU2-44P-201ENST00000516795 194 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 RNA5SP252-201ENST00000391131 119 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 RNA5SP498-201ENST00000411342 120 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 AL031183.1-201ENST00000457667 207 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 LARP7P4-201ENST00000481075 878 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 RN7SKP179-201ENST00000516126 217 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 ERHP1-201ENST00000523006 310 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 AC009229.3-201ENST00000608056 282 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 MIR2909-201ENST00000617113 69 ntBASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
CSPG4Q6UVK1 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 RNU6-666P-201ENST00000363499 107 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 SNORA62.1-201ENST00000364287 154 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 OR6C66P-201ENST00000414917 930 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 MTCYBP29-201ENST00000436327 1006 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 RPL9P9-202ENST00000466501 579 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 PCNAP1-202ENST00000595299 752 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 CISD1P1-201ENST00000393907 327 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 RNU6-193P-201ENST00000410977 107 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 RPL21P32-201ENST00000419877 477 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AL591704.2-201ENST00000421658 181 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 RPL21P66-201ENST00000426566 466 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 AC093716.1-201ENST00000435923 377 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 NF1P3-201ENST00000457709 450 ntBASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.76□□□□□ -2.29
CSPG4Q6UVK1 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC0.76□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms