| CRTC3 | Q6UUV7 | MTND6P33-201 | ENST00000571794 | 183 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | NUTF2P8-201 | ENST00000604593 | 363 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RNU6-85P-201 | ENST00000605989 | 107 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC100812.1-201 | ENST00000607622 | 580 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | BPY2B-204 | ENST00000615850 | 321 nt | APPRIS P5 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | BPY2C-204 | ENST00000618574 | 321 nt | APPRIS P5 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | MIR7154-201 | ENST00000620673 | 73 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC006065.5-201 | ENST00000623427 | 349 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | CYP3A43-217 | ENST00000631161 | 328 nt | TSL 5 BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AL606534.2-204 | ENST00000635008 | 178 nt | BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | TMEM30A-202 | ENST00000370050 | 3775 nt | TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | FANCI-202 | ENST00000310775 | 4743 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | C8orf34-203 | ENST00000348340 | 3571 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | ZNF28-203 | ENST00000438150 | 5171 nt | TSL 2 BASIC | 4.42 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | MACF1-231 | ENST00000564288 | 24828 nt | APPRIS ALT2 TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AL365440.1-201 | ENST00000436135 | 2167 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | GYPA-202 | ENST00000360771 | 2659 nt | APPRIS P3 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | ADGRL2-201 | ENST00000319517 | 5479 nt | APPRIS P2 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | ARHGEF38-202 | ENST00000420470 | 5454 nt | APPRIS P1 TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RPAP2-203 | ENST00000610020 | 16993 nt | APPRIS P1 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | SLC10A2-201 | ENST00000245312 | 3779 nt | APPRIS P1 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | CNGB3-201 | ENST00000320005 | 4347 nt | APPRIS P1 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | Y_RNA.151-201 | ENST00000363566 | 112 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | OR51A4-201 | ENST00000380373 | 1002 nt | APPRIS P1 BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RNU1-63P-201 | ENST00000383902 | 164 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RNU6-1074P-201 | ENST00000383995 | 104 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RNU6-101P-201 | ENST00000410323 | 104 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RNU2-23P-201 | ENST00000410545 | 195 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RNU6-847P-201 | ENST00000411115 | 108 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AL513331.1-201 | ENST00000411908 | 397 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC063979.1-201 | ENST00000415539 | 377 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AL353621.1-201 | ENST00000418219 | 243 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AL356010.2-201 | ENST00000422844 | 197 nt | TSL 3 BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RPL18P10-201 | ENST00000425606 | 538 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AL732292.1-201 | ENST00000426692 | 226 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AL078601.2-201 | ENST00000429444 | 474 nt | TSL 2 BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC069285.2-201 | ENST00000440210 | 275 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC012671.1-201 | ENST00000451912 | 203 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | U8.20-201 | ENST00000459445 | 131 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC087588.1-201 | ENST00000462203 | 316 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RPL23AP2-201 | ENST00000471227 | 466 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC068781.1-201 | ENST00000488231 | 618 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | VN1R104P-201 | ENST00000505115 | 1009 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC008716.1-201 | ENST00000511084 | 513 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC015795.1-201 | ENST00000513669 | 327 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RNU6-1271P-201 | ENST00000517049 | 105 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC104576.1-201 | ENST00000524225 | 88 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC023034.1-201 | ENST00000558141 | 518 nt | TSL 3 BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC144836.1-201 | ENST00000575911 | 340 nt | TSL 2 BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC093227.2-201 | ENST00000589357 | 285 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | ZNF616-202 | ENST00000596290 | 568 nt | TSL 4 BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC018889.1-201 | ENST00000605372 | 397 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | RNA5SP108-201 | ENST00000605921 | 117 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | HMGN2P28-201 | ENST00000606102 | 262 nt | BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | LGALS13-204 | ENST00000621475 | 494 nt | APPRIS ALT2 TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | TBC1D15-210 | ENST00000485960 | 2489 nt | APPRIS P1 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | LINC01566-202 | ENST00000569242 | 2801 nt | TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | FSBP-203 | ENST00000611249 | 2181 nt | APPRIS P1 TSL 5 BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | UBE2W-207 | ENST00000602593 | 2201 nt | APPRIS P1 TSL 1 (best) BASIC | 4.41 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | FILIP1L-209 | ENST00000487087 | 2321 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | PATJ-202 | ENST00000316485 | 3657 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC087190.4-201 | ENST00000574616 | 8334 nt | BASIC | 4.4 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | DSG2-AS1-202 | ENST00000583706 | 2024 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.7 | | |
| CRTC3 | Q6UUV7 | AC126755.2-208 | ENST00000327792 | 462 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AC138969.1-213 | ENST00000331436 | 462 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | RNU6-596P-201 | ENST00000365395 | 98 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | Y_RNA.476-201 | ENST00000384347 | 108 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | RNU6-1222P-201 | ENST00000384615 | 107 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AC097374.1-203 | ENST00000400783 | 485 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | ELOCP19-201 | ENST00000411919 | 318 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | LINC01737-201 | ENST00000412647 | 403 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AL513365.2-201 | ENST00000423060 | 529 nt | TSL 2 BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | MRPS18CP6-201 | ENST00000423587 | 223 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | UBE2D3P2-201 | ENST00000424409 | 445 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | RPL21P91-201 | ENST00000429231 | 479 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | CEP57L1P1-201 | ENST00000430943 | 1201 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AC011998.1-201 | ENST00000433403 | 117 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | HSPD1P21-201 | ENST00000436541 | 245 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AC018359.1-201 | ENST00000442567 | 574 nt | TSL 4 BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AC073325.1-201 | ENST00000443714 | 542 nt | TSL 4 BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | FTH1P25-201 | ENST00000447665 | 469 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AL441989.1-201 | ENST00000454204 | 382 nt | TSL 3 BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | PCMTD1P1-201 | ENST00000455560 | 355 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | RPL9P32-201 | ENST00000464118 | 620 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | RPS26P28-201 | ENST00000470806 | 348 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | RPL23AP65-201 | ENST00000475608 | 468 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AC010655.3-201 | ENST00000478818 | 450 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | HSPE1P6-201 | ENST00000479457 | 291 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | RPS15AP34-201 | ENST00000487776 | 387 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | SUMO2P6-201 | ENST00000505273 | 288 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AC025475.1-201 | ENST00000512939 | 487 nt | TSL 3 BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | APOOP4-201 | ENST00000513530 | 597 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | MDM2-221 | ENST00000517852 | 393 nt | TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AL133279.1-202 | ENST00000556789 | 456 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | MYL12BP1-201 | ENST00000569826 | 507 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | PSMD5-AS1-203 | ENST00000589026 | 525 nt | TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | OR1M4P-201 | ENST00000589199 | 287 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | BPIFA4P-203 | ENST00000603168 | 689 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AL355297.3-201 | ENST00000604082 | 446 nt | BASIC | 4.4 | □□□□□ -1.71 | | |
| CRTC3 | Q6UUV7 | AL160281.1-201 | ENST00000605307 | 311 nt | BASIC | 4.4 | □□□□□ -1.71 | | |