Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6ATAC-201ENST00000408749 126 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 RNU2-62P-201ENST00000410868 191 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 RNU6-55P-201ENST00000411092 107 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 RN7SKP140-201ENST00000411196 284 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 RNU6-954P-201ENST00000411355 107 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC009161.1-201ENST00000417306 376 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 OR1AA1P-201ENST00000419597 916 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC007389.2-201ENST00000434630 306 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC006539.3-201ENST00000454258 129 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC108059.3-201ENST00000456388 214 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AL590639.1-201ENST00000456484 337 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 RPS29P15-201ENST00000458329 171 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 RNU7-66P-201ENST00000459469 62 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 S100A11P1-201ENST00000477525 312 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC106707.2-201ENST00000484182 374 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC068305.1-201ENST00000497406 726 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 FAM206BP-201ENST00000510179 541 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 IGKV2D-36-201ENST00000518643 226 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 TRMT10BP1-201ENST00000519377 943 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AL118558.2-201ENST00000556294 238 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 RPL21P12-201ENST00000559810 515 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC026464.5-201ENST00000562497 722 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AP001486.3-201ENST00000615334 372 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC040168.1-201ENST00000623594 991 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 AC032011.1-201ENST00000611703 1549 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 TNPO1P3-201ENST00000436471 2662 ntBASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
ZNF549Q6P9A3 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AL365440.1-201ENST00000436135 2167 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 SNORA62.1-201ENST00000364287 154 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 SNORA62.3-201ENST00000365110 153 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 U3.15-201ENST00000365398 212 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 Y_RNA.431-201ENST00000384086 102 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 SNORD51-201ENST00000384320 80 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 RPS7P15-201ENST00000415804 584 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 HSPE1P1-201ENST00000421494 318 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 Z95327.1-201ENST00000446082 482 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 MTND4P19-201ENST00000446659 478 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC016696.1-201ENST00000446949 318 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 SNORA84-201ENST00000459229 133 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 RNU7-180P-201ENST00000459240 63 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 SNORD19B-201ENST00000459623 84 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC007547.1-201ENST00000462177 490 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 RN7SL542P-201ENST00000467147 294 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC021205.2-201ENST00000480069 347 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 MTND5P5-201ENST00000503764 376 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC110768.1-201ENST00000509222 400 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 RN7SKP116-201ENST00000516902 319 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 HMGB1P41-201ENST00000520234 440 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 RPL7P20-201ENST00000520308 745 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AP000857.1-201ENST00000532151 543 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC011602.1-201ENST00000546484 331 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC024619.4-201ENST00000580924 316 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 MIR4293-201ENST00000584305 78 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 LLPHP1-201ENST00000603571 367 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC104237.2-201ENST00000612456 443 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AL603758.1-201ENST00000618654 241 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC244100.1-202ENST00000621554 382 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AL136313.1-201ENST00000624804 202 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 MIR4496-201ENST00000635896 61 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 AC012442.3-202ENST00000636742 206 ntBASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.41□□□□□ -1.86
ZNF549Q6P9A3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF549Q6P9A3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF549Q6P9A3 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF549Q6P9A3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ZNF549Q6P9A3 AL161912.2-201ENST00000565707 3007 ntBASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms