Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AC005255.1-201ENST00000593748 216 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AC012669.1-201ENST00000603209 283 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AL161756.2-201ENST00000604597 246 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 AC012468.1-201ENST00000604888 430 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 U4.1-201ENST00000620349 87 ntBASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
USPL1Q5W0Q7 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AL049555.1-201ENST00000562834 1933 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 RNU1-115P-201ENST00000365329 160 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 HDGFP1-201ENST00000405943 252 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 Y_RNA.594-201ENST00000410373 140 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 RNU4-78P-201ENST00000410940 126 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 RPL7P37-201ENST00000425095 738 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AL645568.3-201ENST00000433683 316 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 RPL23AP83-201ENST00000434984 473 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 HIGD1AP11-201ENST00000438361 280 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AL731563.1-201ENST00000442202 214 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC006011.1-201ENST00000442758 349 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC104472.2-201ENST00000469035 601 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC116655.1-201ENST00000508324 901 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 RNU6-794P-201ENST00000517261 64 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC008694.2-201ENST00000517591 306 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 GNAI2P1-201ENST00000541815 315 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC005899.2-201ENST00000584353 90 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 BNIP3P16-201ENST00000589779 534 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC007619.2-201ENST00000605743 379 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC092608.2-201ENST00000624427 218 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 AC066616.2-201ENST00000559334 1481 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 HSPA8P4-201ENST00000511877 1920 ntBASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.23□□□□□ -1.57
USPL1Q5W0Q7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 RNU6-14P-201ENST00000384630 106 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 RNU6-95P-201ENST00000384697 107 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 RNA5SP296-201ENST00000410523 111 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 RPL7AP73-201ENST00000413490 353 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 Z99755.1-201ENST00000414048 380 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 AL160275.3-201ENST00000423876 471 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 AC236972.1-201ENST00000433225 199 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 RPL7P49-201ENST00000471402 708 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 AC128713.1-201ENST00000471495 306 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 RNU6-470P-201ENST00000515954 104 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 Y_RNA.670-201ENST00000516255 105 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 AC008269.2-201ENST00000561915 1105 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 MIR7154-201ENST00000620673 73 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 AC090337.1-201ENST00000579651 2074 ntBASIC5.22□□□□□ -1.57
USPL1Q5W0Q7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.57
USPL1Q5W0Q7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
USPL1Q5W0Q7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.21□□□□□ -1.57
USPL1Q5W0Q7 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 RNA5SP119-201ENST00000362715 117 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 RNU6-356P-201ENST00000384140 107 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 RNY1P14-201ENST00000384426 108 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 RNU6-45P-201ENST00000384471 107 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 UBE2V1P4-201ENST00000425374 344 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 USMG5P1-201ENST00000425964 177 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 ABCF2P2-201ENST00000450549 296 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 MTND4LP22-201ENST00000508209 276 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 MRPS35P2-201ENST00000508242 191 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 AC069113.1-201ENST00000517763 267 ntBASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.21□□□□□ -1.58
USPL1Q5W0Q7 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms