Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 RPL9P9-202ENST00000466501 579 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 MED28P2-201ENST00000475771 317 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.59□□□□□ -1.51
RNF20Q5VTR2 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.59□□□□□ -1.51
RNF20Q5VTR2 AC006557.5-201ENST00000603126 811 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 AC211433.2-201ENST00000608433 387 ntBASIC5.59□□□□□ -1.51
RNF20Q5VTR2 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
RNF20Q5VTR2 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RNF20Q5VTR2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 ZNF299P-201ENST00000406845 1804 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AL391987.6-201ENST00000305671 199 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 MIR921-201ENST00000401133 56 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 Z98745.1-201ENST00000402553 494 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 RN7SKP100-201ENST00000411258 284 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 EI24P1-201ENST00000416584 867 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AL592045.1-201ENST00000429867 352 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AC092573.2-201ENST00000434546 243 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 RPS20P1-201ENST00000434853 354 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AC016831.4-201ENST00000438302 307 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 TPT1P13-201ENST00000449760 499 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AC007686.1-201ENST00000488511 463 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 SUMO2P6-201ENST00000505273 288 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AC008716.1-201ENST00000511084 513 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 RNU1-86P-201ENST00000516108 154 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 RN7SKP276-201ENST00000516242 268 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 RNU6-911P-201ENST00000516523 104 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 RNU5B-3P-201ENST00000516601 115 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 RNU1-107P-201ENST00000516617 154 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 SNORA31.22-201ENST00000517204 135 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AC015912.2-201ENST00000571053 181 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 Z99571.1-201ENST00000636677 394 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 AP000560.1-201ENST00000624150 1937 ntBASIC5.58□□□□□ -1.52
RNF20Q5VTR2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RNF20Q5VTR2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 RNA5SP191-201ENST00000362585 102 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 RNU1-76P-201ENST00000362903 159 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AL603910.2-201ENST00000407268 136 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 RNA5SP36-201ENST00000410197 133 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 MTATP6P29-201ENST00000415057 132 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AC096920.1-201ENST00000423991 241 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AC104332.1-201ENST00000440471 797 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AL121871.1-201ENST00000443413 436 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 IGKV2-23-201ENST00000518729 323 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AC134698.5-201ENST00000519444 336 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 DEFB108E-201ENST00000524692 240 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 MIR5701-3-201ENST00000578890 82 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 MIR5701-1-201ENST00000585138 82 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AC067852.4-201ENST00000590314 478 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 MIR5701-2-201ENST00000615634 82 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 MIR4275-201ENST00000636486 87 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AL450472.1-202ENST00000637286 180 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RNF20Q5VTR2 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.57□□□□□ -1.52
RNF20Q5VTR2 AP001148.1-201ENST00000624124 2359 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 HSPA8P1-201ENST00000425843 1833 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 Z75746.1-201ENST00000440243 2080 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RNF20Q5VTR2 RNU6-76P-201ENST00000384060 104 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.56□□□□□ -1.52
RNF20Q5VTR2 AP000275.1-201ENST00000411943 390 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF20Q5VTR2 AC140479.3-201ENST00000418944 1126 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 RNU6-1037P-201ENST00000459571 107 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 AL110118.1-201ENST00000553543 400 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.56□□□□□ -1.52
RNF20Q5VTR2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.56□□□□□ -1.52
RNF20Q5VTR2 MIR3934-201ENST00000579806 107 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 RN7SL176P-201ENST00000580352 264 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 MIR4737-201ENST00000583979 81 ntBASIC5.56□□□□□ -1.52
RNF20Q5VTR2 BDH2P1-201ENST00000602288 736 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms