Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 U1.1-201ENST00000384101 164 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 RNU6-1127P-201ENST00000384580 107 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 ARL5AP1-201ENST00000418991 388 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 RPS15AP6-201ENST00000420703 385 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 RPL21P99-201ENST00000480369 423 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 AC116353.2-201ENST00000505332 712 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 MTCO3P9-201ENST00000506989 781 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 RNU6-928P-201ENST00000516876 104 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 IGKV2-23-201ENST00000518729 323 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 AF235103.2-201ENST00000525753 346 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 MTCO3P24-201ENST00000572729 782 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 AC025627.2-201ENST00000576220 160 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 MIR548AC-201ENST00000585049 88 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 IPO5P1-202ENST00000600039 287 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 AC008745.1-201ENST00000604064 271 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 MIR6820-201ENST00000611508 62 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 DUSP12P1-201ENST00000612874 516 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 AC011944.2-201ENST00000624440 683 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 OR52H1-202ENST00000641796 1061 ntBASIC3.73□□□□□ -1.81
RNF220Q5VTB9 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
RNF220Q5VTB9 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 Y_RNA.33-201ENST00000362591 102 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 Y_RNA.231-201ENST00000364358 102 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 RNU6-715P-201ENST00000365204 103 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 RNU6-434P-201ENST00000384376 107 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 RNU6-393P-201ENST00000384475 107 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 MIR514A2-201ENST00000385131 88 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 MIR514A3-201ENST00000385132 88 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 SNORD70.1-201ENST00000391007 85 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 FGF7P8-201ENST00000402994 292 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 AL592114.1-201ENST00000403842 483 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 AL139413.1-201ENST00000421309 217 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 RPL31P12-201ENST00000422587 358 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 HMGB1P31-201ENST00000437242 427 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 RPL12P25-201ENST00000455592 494 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 RPL23AP62-201ENST00000463396 453 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 RN7SL459P-201ENST00000481078 302 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 FCF1P3-201ENST00000496394 590 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 BNIP3P6-201ENST00000549284 499 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 AC006111.3-201ENST00000622137 383 ntBASIC3.72□□□□□ -1.81
RNF220Q5VTB9 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
RNF220Q5VTB9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 RNU4-20P-201ENST00000365601 151 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 RNU6-1025P-201ENST00000410629 104 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 RPL21P90-201ENST00000415692 466 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AC108032.1-201ENST00000416706 207 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 RPL17P36-201ENST00000420302 549 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 RPL18P10-201ENST00000425606 538 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 SRIP2-201ENST00000428470 166 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 ERLEC1P1-201ENST00000433806 578 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 RPS15AP27-201ENST00000449183 343 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 U3.44-201ENST00000458938 192 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AC009901.1-201ENST00000506703 541 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AP003730.1-201ENST00000524605 285 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 MIR5583-1-201ENST00000580941 59 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AL592436.1-201ENST00000605135 558 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 RNU6-89P-201ENST00000606519 100 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 U6.42-201ENST00000618440 107 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 MTND4P35-201ENST00000604257 1375 ntBASIC3.71□□□□□ -1.82
RNF220Q5VTB9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
RNF220Q5VTB9 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 234.8 ms