Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC38Q502W7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC38Q502W7 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC38Q502W7 API5P2-201ENST00000397055 1498 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 Y_RNA.41-201ENST00000362646 102 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 RNU4-48P-201ENST00000365559 182 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 RNA5SP252-201ENST00000391131 119 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC080125.1-201ENST00000414888 684 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC092809.3-201ENST00000415453 231 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC38Q502W7 MTCO2P19-201ENST00000427513 598 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 AL592045.1-201ENST00000429867 352 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 MTND1P34-201ENST00000438556 671 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.63□□□□□ -1.83
CCDC38Q502W7 snoU13.28-201ENST00000459235 104 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 RPL9P6-201ENST00000492764 598 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 ARL4AP2-201ENST00000507378 601 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC026333.2-201ENST00000542164 106 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC38Q502W7 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC38Q502W7 ADI1P3-201ENST00000549509 470 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.63□□□□□ -1.83
CCDC38Q502W7 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC025449.1-201ENST00000603896 529 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC012409.4-201ENST00000612923 249 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC005609.4-201ENST00000625071 447 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC099654.12-201ENST00000639868 649 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC38Q502W7 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC38Q502W7 AC103710.2-202ENST00000641454 2853 ntBASIC3.63□□□□□ -1.83
CCDC38Q502W7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CCDC38Q502W7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC38Q502W7 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC38Q502W7 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 RNA5SP51-201ENST00000364750 119 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 SNORA14A-201ENST00000364773 135 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 DYNLT3P1-201ENST00000378574 347 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 Y_RNA.534-201ENST00000384599 112 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 RNU6-606P-201ENST00000384721 111 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC099548.1-201ENST00000421443 426 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 RPS15AP9-201ENST00000439856 381 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 DDX3P2-201ENST00000446138 111 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 RNU7-182P-201ENST00000459009 62 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC034236.1-201ENST00000469891 373 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 RN7SL594P-201ENST00000470590 287 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC010265.1-201ENST00000513509 211 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 RNU6-914P-201ENST00000516749 109 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 MIR2276-201ENST00000516886 89 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 RNA5SP165-201ENST00000517142 115 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 MIR4429-201ENST00000580105 73 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC010591.1-201ENST00000603941 649 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC012557.2-201ENST00000605919 418 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 SNORA51-201ENST00000606420 132 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 AP001486.3-201ENST00000615334 372 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC006133.1-201ENST00000617106 264 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC098679.4-201ENST00000624241 654 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC124864.2-201ENST00000624736 186 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC007823.1-201ENST00000569932 1566 ntBASIC3.62□□□□□ -1.83
CCDC38Q502W7 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CCDC38Q502W7 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.62□□□□□ -1.83
CCDC38Q502W7 AC010680.1-201ENST00000590024 3590 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC38Q502W7 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC38Q502W7 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CCDC38Q502W7 MIR301A-201ENST00000385261 86 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 MIR670-201ENST00000390142 98 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 RNU2-68P-201ENST00000410878 191 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 OR51A5P-201ENST00000415429 942 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 NDUFB4P5-201ENST00000415445 361 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC38Q502W7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.61□□□□□ -1.83
CCDC38Q502W7 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CCDC38Q502W7 AL445584.1-201ENST00000431451 330 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AL591704.1-201ENST00000432574 275 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 RPL36AP53-201ENST00000432891 316 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AC009969.1-201ENST00000438726 172 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AL357552.1-201ENST00000445254 415 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 DPPA3P1-201ENST00000448050 469 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 RPL12P25-201ENST00000455592 494 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 RPS3AP14-201ENST00000483907 780 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 RPS15AP34-201ENST00000487776 387 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 AP002812.1-201ENST00000495378 474 ntBASIC3.61□□□□□ -1.83
CCDC38Q502W7 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms