Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 CBWD4P-201ENST00000445695 655 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RFX4Q33E94 WASF1P1-201ENST00000447560 1131 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.28□□□□□ -2.04
RFX4Q33E94 snoU13.28-201ENST00000459235 104 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 RPS20P20-201ENST00000460498 340 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RFX4Q33E94 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.28□□□□□ -2.04
RFX4Q33E94 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.28□□□□□ -2.04
RFX4Q33E94 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.28□□□□□ -2.04
RFX4Q33E94 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC2.28□□□□□ -2.04
RFX4Q33E94 RN7SKP287-201ENST00000516546 266 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.28□□□□□ -2.04
RFX4Q33E94 NAP1L1P1-201ENST00000524793 1063 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AP002748.2-201ENST00000528671 348 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AP003461.1-201ENST00000528866 78 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.28□□□□□ -2.04
RFX4Q33E94 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RFX4Q33E94 AC009094.1-201ENST00000564443 426 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AC068135.2-201ENST00000569293 1028 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 ISCA1P3-201ENST00000577104 373 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 MIR3200-201ENST00000580767 85 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 MIR4307-201ENST00000582802 84 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AC008751.2-201ENST00000597885 980 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AC093424.1-201ENST00000604999 338 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AC091965.4-201ENST00000607691 587 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AL355472.4-201ENST00000610233 626 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 UCA1.1-201ENST00000620952 75 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AP002791.1-201ENST00000623291 381 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 AC017037.3-201ENST00000625016 472 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.28□□□□□ -2.04
RFX4Q33E94 AC092192.1-201ENST00000633154 1018 ntBASIC2.28□□□□□ -2.04
RFX4Q33E94 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.28□□□□□ -2.04
RFX4Q33E94 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RFX4Q33E94 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.05
RFX4Q33E94 CR848007.1-201ENST00000442354 1699 ntBASIC2.28□□□□□ -2.05
RFX4Q33E94 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.28□□□□□ -2.05
RFX4Q33E94 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.28□□□□□ -2.05
RFX4Q33E94 PABPC1P9-201ENST00000426076 1612 ntBASIC2.28□□□□□ -2.05
RFX4Q33E94 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFX4Q33E94 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.27□□□□□ -2.05
RFX4Q33E94 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.27□□□□□ -2.05
RFX4Q33E94 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
RFX4Q33E94 RNU6-7-201ENST00000364784 107 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 RNU6-8-201ENST00000365467 107 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 RNU6-1072P-201ENST00000384703 107 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 RNU6-253P-201ENST00000384730 105 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 RNU6-443P-201ENST00000384780 107 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AC096664.2-201ENST00000411843 406 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.27□□□□□ -2.05
RFX4Q33E94 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.27□□□□□ -2.05
RFX4Q33E94 AL593851.1-201ENST00000426171 157 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 RPL35AP22-201ENST00000436855 335 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 ARPC3P1-201ENST00000437218 533 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AL008629.1-201ENST00000438615 184 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 BMI1P1-201ENST00000445879 941 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.27□□□□□ -2.05
RFX4Q33E94 AP1S2P1-201ENST00000457344 379 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 RNU6-420P-201ENST00000458780 107 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 MTCYBP35-201ENST00000503630 1137 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.27□□□□□ -2.05
RFX4Q33E94 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.27□□□□□ -2.05
RFX4Q33E94 RNA5SP471-201ENST00000516971 106 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.27□□□□□ -2.05
RFX4Q33E94 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.27□□□□□ -2.05
RFX4Q33E94 ELOCP32-201ENST00000548625 324 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.27□□□□□ -2.05
RFX4Q33E94 ELOCP29-201ENST00000588193 334 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AF038458.1-201ENST00000588406 262 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
RFX4Q33E94 AL353778.1-201ENST00000603149 408 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AC005000.2-201ENST00000605468 310 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AC034229.4-201ENST00000607861 441 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AL391813.2-201ENST00000609113 322 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 SDR42E1P2-201ENST00000614861 481 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.27□□□□□ -2.05
RFX4Q33E94 AC008993.2-201ENST00000631744 806 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 MIR4275-201ENST00000636486 87 ntBASIC2.27□□□□□ -2.05
RFX4Q33E94 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RFX4Q33E94 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RFX4Q33E94 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RFX4Q33E94 AC104454.1-201ENST00000421341 1401 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.26□□□□□ -2.05
RFX4Q33E94 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
RFX4Q33E94 Y_RNA.18-201ENST00000362461 102 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 RNU1-105P-201ENST00000363470 161 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
RFX4Q33E94 RNU6-1035P-201ENST00000384477 107 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 TXNP7-201ENST00000406296 293 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.26□□□□□ -2.05
RFX4Q33E94 AC010099.3-201ENST00000423896 409 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 AC092047.1-201ENST00000424997 240 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX4Q33E94 GDI2P2-201ENST00000445131 608 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.26□□□□□ -2.05
RFX4Q33E94 AC008481.1-201ENST00000463278 396 ntBASIC2.26□□□□□ -2.05
RFX4Q33E94 AC010631.1-201ENST00000474150 156 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms