Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MIR548H3-201ENST00000408771 118 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 RNU6-121P-201ENST00000410525 99 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 RNU6-130P-201ENST00000411112 103 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDH1Q08174 AL645608.4-201ENST00000423619 154 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDH1Q08174 AC231760.1-201ENST00000498002 260 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 AC140172.1-201ENST00000502928 141 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 AC108145.1-201ENST00000503770 153 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDH1Q08174 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 RN7SKP92-201ENST00000517266 244 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 UTP23-205ENST00000520733 369 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDH1Q08174 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDH1Q08174 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDH1Q08174 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.7□□□□□ -1.66
PCDH1Q08174 AC068446.3-201ENST00000555285 382 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 SNORA74C-1-201ENST00000580726 201 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDH1Q08174 AL355877.2-201ENST00000603670 358 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 AL121932.1-201ENST00000605542 214 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDH1Q08174 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC4.7□□□□□ -1.66
PCDH1Q08174 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.7□□□□□ -1.66
PCDH1Q08174 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PCDH1Q08174 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDH1Q08174 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PCDH1Q08174 AL139811.1-201ENST00000424779 2299 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.7□□□□□ -1.66
PCDH1Q08174 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
PCDH1Q08174 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH1Q08174 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDH1Q08174 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH1Q08174 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH1Q08174 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
PCDH1Q08174 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH1Q08174 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH1Q08174 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PCDH1Q08174 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
PCDH1Q08174 SNORA58B-201ENST00000364259 136 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 RN7SKP227-201ENST00000364445 330 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 RNU6-708P-201ENST00000384217 107 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 TBCAP2-201ENST00000416175 326 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH1Q08174 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDH1Q08174 AL772161.1-201ENST00000439130 476 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH1Q08174 AC022795.1-201ENST00000473808 480 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 RPL7AP6-201ENST00000477943 801 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 RPL30P10-201ENST00000488148 337 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH1Q08174 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH1Q08174 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH1Q08174 RNU6-182P-201ENST00000516970 105 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 RN7SKP147-201ENST00000517154 244 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH1Q08174 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.69□□□□□ -1.66
PCDH1Q08174 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.69□□□□□ -1.66
PCDH1Q08174 ASNSP1-201ENST00000518311 1939 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 AP000560.1-201ENST00000624150 1937 ntBASIC4.69□□□□□ -1.66
PCDH1Q08174 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.69□□□□□ -1.66
PCDH1Q08174 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.69□□□□□ -1.66
PCDH1Q08174 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH1Q08174 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH1Q08174 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH1Q08174 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH1Q08174 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.68□□□□□ -1.66
PCDH1Q08174 AC126323.6-202ENST00000568092 3511 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH1Q08174 AL365440.1-201ENST00000436135 2167 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDH1Q08174 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PCDH1Q08174 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
PCDH1Q08174 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH1Q08174 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PCDH1Q08174 SNORD27-201ENST00000363981 72 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH1Q08174 Y_RNA.785-201ENST00000384290 109 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 RNA5SP494-201ENST00000410653 129 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 RNU2-25P-201ENST00000411041 191 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDH1Q08174 MYL8P-204ENST00000431574 518 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH1Q08174 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDH1Q08174 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDH1Q08174 RNU6-709P-201ENST00000517257 104 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 AC008033.2-201ENST00000542626 177 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 FAM60BP-201ENST00000578364 658 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.68□□□□□ -1.66
PCDH1Q08174 AL022401.1-201ENST00000619498 108 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 AC068870.2-201ENST00000620635 389 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.68□□□□□ -1.66
PCDH1Q08174 AL360181.4-201ENST00000621752 134 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 AC019206.1-201ENST00000621938 425 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 AC006065.5-201ENST00000623427 349 ntBASIC4.68□□□□□ -1.66
PCDH1Q08174 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.68□□□□□ -1.66
PCDH1Q08174 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PCDH1Q08174 AP001273.1-201ENST00000624493 3152 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms