Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC0.73□□□□□ -2.29
TFF3Q07654 AC012443.1-201ENST00000605605 231 ntBASIC0.73□□□□□ -2.29
TFF3Q07654 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC0.73□□□□□ -2.29
TFF3Q07654 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
TFF3Q07654 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.72□□□□□ -2.29
TFF3Q07654 RNU6-17P-201ENST00000384245 107 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 RNU6-18P-201ENST00000384527 107 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 OR9R1P-201ENST00000412200 877 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 VN1R36P-201ENST00000414936 291 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC0.72□□□□□ -2.29
TFF3Q07654 AL022400.1-201ENST00000423946 935 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.72□□□□□ -2.29
TFF3Q07654 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.72□□□□□ -2.29
TFF3Q07654 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.72□□□□□ -2.29
TFF3Q07654 RPL23AP33-201ENST00000442301 452 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC0.72□□□□□ -2.29
TFF3Q07654 AC018437.1-201ENST00000492214 406 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 AC008834.1-201ENST00000511612 175 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 SNORA31.18-201ENST00000517043 134 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC0.72□□□□□ -2.29
TFF3Q07654 CR383656.8-201ENST00000549046 145 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.72□□□□□ -2.29
TFF3Q07654 LINC00933-203ENST00000559812 219 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 FAM60BP-201ENST00000578364 658 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.72□□□□□ -2.29
TFF3Q07654 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC0.72□□□□□ -2.29
TFF3Q07654 AC013244.2-201ENST00000603396 103 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 DUSP12P1-201ENST00000612874 516 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC0.72□□□□□ -2.29
TFF3Q07654 AP003476.1-201ENST00000623984 516 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 AP003485.1-201ENST00000625093 753 ntBASIC0.72□□□□□ -2.29
TFF3Q07654 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC0.72□□□□□ -2.29
TFF3Q07654 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.29
TFF3Q07654 AL442644.1-201ENST00000454390 3105 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 SUCLA2P2-201ENST00000417269 1309 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
TFF3Q07654 RNU6-37P-201ENST00000362692 107 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 RNU6-11P-201ENST00000364234 107 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 BTF3L4P2-201ENST00000392798 346 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC0.71□□□□□ -2.3
TFF3Q07654 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
TFF3Q07654 RPS24P6-201ENST00000452670 400 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 NAP1L1P3-201ENST00000462291 880 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 OR2A41P-201ENST00000473586 105 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.71□□□□□ -2.3
TFF3Q07654 RPL30P14-201ENST00000482744 348 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.71□□□□□ -2.3
TFF3Q07654 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.71□□□□□ -2.3
TFF3Q07654 RNA5SP165-201ENST00000517142 115 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 RRN3P3-201ENST00000549207 578 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.71□□□□□ -2.3
TFF3Q07654 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC0.71□□□□□ -2.3
TFF3Q07654 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC0.71□□□□□ -2.3
TFF3Q07654 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC0.71□□□□□ -2.3
TFF3Q07654 AL450336.1-201ENST00000605180 586 ntBASIC0.71□□□□□ -2.3
TFF3Q07654 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.71□□□□□ -2.3
TFF3Q07654 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.71□□□□□ -2.3
TFF3Q07654 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC0.71□□□□□ -2.3
TFF3Q07654 SNORA68.1-201ENST00000364537 132 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 SNORA51.12-201ENST00000384448 134 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 RNU6-193P-201ENST00000410977 107 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 PIGPP2-201ENST00000411569 458 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.7□□□□□ -2.3
TFF3Q07654 EBAG9P1-201ENST00000418955 543 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 RPL7P30-201ENST00000420888 709 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 AL596276.1-201ENST00000434465 418 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 AC234064.1-201ENST00000436312 247 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 RPL39P29-201ENST00000447779 157 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 TRGVB-201ENST00000453257 471 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC0.7□□□□□ -2.3
TFF3Q07654 AL583843.1-201ENST00000456070 346 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 RPL39P28-201ENST00000465655 155 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 AC005908.1-201ENST00000468701 347 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 RPS27P26-201ENST00000494583 239 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC0.7□□□□□ -2.3
TFF3Q07654 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.7□□□□□ -2.3
TFF3Q07654 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC0.7□□□□□ -2.3
TFF3Q07654 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC0.7□□□□□ -2.3
TFF3Q07654 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.7□□□□□ -2.3
TFF3Q07654 RPL21P5-201ENST00000554662 472 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
TFF3Q07654 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
TFF3Q07654 MIR6513-201ENST00000621188 64 ntBASIC0.7□□□□□ -2.3
TFF3Q07654 NACAP2-201ENST00000318548 624 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 SNORD114-2-201ENST00000363953 78 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 RNU4-7P-201ENST00000364758 141 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 ERHP2-201ENST00000402323 299 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 MORN2-203ENST00000409131 544 ntTSL 5 BASIC0.69□□□□□ -2.3
TFF3Q07654 RNU2-32P-201ENST00000411193 191 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 UBE2V1P9-201ENST00000414760 368 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 EZH2P1-201ENST00000431167 291 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.69□□□□□ -2.3
TFF3Q07654 AL353718.1-201ENST00000451028 517 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 AL513343.1-201ENST00000451818 792 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC0.69□□□□□ -2.3
TFF3Q07654 MTATP6P7-201ENST00000453315 681 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC0.69□□□□□ -2.3
TFF3Q07654 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
TFF3Q07654 AP005902.1-201ENST00000521358 186 ntBASIC0.69□□□□□ -2.3
TFF3Q07654 OR5AL2P-201ENST00000532185 920 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 130.1 ms