Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL022238.1-201ENST00000442557 355 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.53□□□□□ -2.32
HSPG2P98160 MTCO2P32-201ENST00000514865 403 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 SUB1P1-201ENST00000524415 382 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.53□□□□□ -2.32
HSPG2P98160 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC0.53□□□□□ -2.32
HSPG2P98160 AL133507.1-201ENST00000605269 557 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 AL136363.1-201ENST00000605349 337 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 BX322635.1-201ENST00000605804 496 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
HSPG2P98160 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.53□□□□□ -2.32
HSPG2P98160 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.53□□□□□ -2.32
HSPG2P98160 MIR17-201ENST00000385012 84 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 AL512661.1-201ENST00000434586 1253 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.53□□□□□ -2.32
HSPG2P98160 AC008379.1-201ENST00000463655 464 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 AL121769.1-201ENST00000469473 401 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.53□□□□□ -2.32
HSPG2P98160 uc_338.9-201ENST00000617424 182 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 AC022079.2-201ENST00000619739 566 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 MIR409-201ENST00000362237 79 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 SNORA2A-201ENST00000383885 135 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 MIR627-201ENST00000384979 97 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC0.53□□□□□ -2.32
HSPG2P98160 USP9YP35-201ENST00000435696 412 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 AC010285.1-201ENST00000470580 392 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 RPS27P21-201ENST00000486977 252 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC0.53□□□□□ -2.32
HSPG2P98160 AC068831.7-201ENST00000616954 363 ntBASIC0.53□□□□□ -2.32
HSPG2P98160 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
HSPG2P98160 RNU6-942P-201ENST00000363002 107 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 RNU6-16P-201ENST00000384385 107 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AL139397.2-201ENST00000404529 772 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.52□□□□□ -2.33
HSPG2P98160 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
HSPG2P98160 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.52□□□□□ -2.33
HSPG2P98160 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC0.52□□□□□ -2.33
HSPG2P98160 AL121839.1-201ENST00000556233 1185 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.52□□□□□ -2.33
HSPG2P98160 AC126177.8-201ENST00000618339 1015 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AC067863.3-201ENST00000624172 122 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC0.52□□□□□ -2.33
HSPG2P98160 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
HSPG2P98160 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
HSPG2P98160 MIR147B-201ENST00000390185 80 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.52□□□□□ -2.33
HSPG2P98160 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
HSPG2P98160 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.52□□□□□ -2.33
HSPG2P98160 DPRXP5-201ENST00000604662 539 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AC008083.4-201ENST00000615076 444 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AC245884.12-201ENST00000615364 59 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AL162373.1-201ENST00000620433 407 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AC068620.4-201ENST00000636730 1182 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AC008555.8-201ENST00000623602 2168 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 NF1P3-201ENST00000457709 450 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC0.52□□□□□ -2.33
HSPG2P98160 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC0.52□□□□□ -2.33
HSPG2P98160 AC013244.2-201ENST00000603396 103 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 Y_RNA.549-201ENST00000384657 102 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 LDHBP3-201ENST00000514909 822 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 SNORA31.18-201ENST00000517043 134 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 CENPUP2-201ENST00000555897 1186 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 VN1R84P-201ENST00000593697 235 ntBASIC0.52□□□□□ -2.33
HSPG2P98160 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC0.51□□□□□ -2.33
HSPG2P98160 MTND4P27-201ENST00000450813 1354 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 CCNB2P1-201ENST00000399411 1150 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 RNU2-70P-201ENST00000410718 179 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AC233728.2-201ENST00000425348 757 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AC104692.1-201ENST00000472406 90 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC0.51□□□□□ -2.33
HSPG2P98160 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC0.51□□□□□ -2.33
HSPG2P98160 AC067942.3-201ENST00000512025 362 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.51□□□□□ -2.33
HSPG2P98160 MIR4653-201ENST00000585107 83 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AC106791.2-201ENST00000604680 391 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC0.51□□□□□ -2.33
HSPG2P98160 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.51□□□□□ -2.33
HSPG2P98160 RNU1-98P-201ENST00000458992 160 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 RNU6-970P-201ENST00000516312 107 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AL391261.3-201ENST00000557194 520 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 uc_338.22-201ENST00000622722 187 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
HSPG2P98160 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
HSPG2P98160 CISD1P1-201ENST00000393907 327 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AC096533.1-201ENST00000411645 353 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 UBE2V1P9-201ENST00000414760 368 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC0.51□□□□□ -2.33
HSPG2P98160 SNORD97-201ENST00000459187 142 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.51□□□□□ -2.33
HSPG2P98160 RN7SKP5-201ENST00000517045 272 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.51□□□□□ -2.33
HSPG2P98160 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC0.51□□□□□ -2.33
HSPG2P98160 MIR4636-201ENST00000582271 80 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.51□□□□□ -2.33
HSPG2P98160 AP001486.3-201ENST00000615334 372 ntBASIC0.51□□□□□ -2.33
HSPG2P98160 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.5□□□□□ -2.33
HSPG2P98160 Y_RNA.136-201ENST00000363444 102 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 RNU6-288P-201ENST00000363690 104 ntBASIC0.5□□□□□ -2.33
HSPG2P98160 SNORA23-201ENST00000365128 182 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms