Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 AC090897.2-201ENST00000581715 130 ntBASIC1.67□□□□□ -2.14
LSM6P62312 AP003973.1-201ENST00000604639 691 ntBASIC1.67□□□□□ -2.14
LSM6P62312 AL355297.2-201ENST00000604792 129 ntBASIC1.67□□□□□ -2.14
LSM6P62312 AC091946.2-201ENST00000606105 291 ntBASIC1.67□□□□□ -2.14
LSM6P62312 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.67□□□□□ -2.14
LSM6P62312 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
LSM6P62312 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.66□□□□□ -2.14
LSM6P62312 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
LSM6P62312 RNU6-1066P-201ENST00000363573 105 ntBASIC1.66□□□□□ -2.14
LSM6P62312 RNU6-549P-201ENST00000384433 107 ntBASIC1.66□□□□□ -2.14
LSM6P62312 RNU6-253P-201ENST00000384730 105 ntBASIC1.66□□□□□ -2.14
LSM6P62312 RNA5SP489-201ENST00000410986 109 ntBASIC1.66□□□□□ -2.14
LSM6P62312 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.66□□□□□ -2.14
LSM6P62312 FABP5P14-201ENST00000437273 393 ntBASIC1.66□□□□□ -2.14
LSM6P62312 RNFT1P2-201ENST00000443064 757 ntBASIC1.66□□□□□ -2.14
LSM6P62312 TRBV1-201ENST00000476502 284 ntBASIC1.66□□□□□ -2.14
LSM6P62312 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM6P62312 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
LSM6P62312 AC096571.1-202ENST00000506634 735 ntBASIC1.66□□□□□ -2.14
LSM6P62312 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC1.66□□□□□ -2.14
LSM6P62312 RNU6-840P-201ENST00000517275 65 ntBASIC1.66□□□□□ -2.14
LSM6P62312 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.66□□□□□ -2.14
LSM6P62312 OR5AL2P-201ENST00000532185 920 ntBASIC1.66□□□□□ -2.14
LSM6P62312 CBX3P7-201ENST00000532876 502 ntBASIC1.66□□□□□ -2.14
LSM6P62312 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM6P62312 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM6P62312 AC007375.1-201ENST00000554513 578 ntBASIC1.66□□□□□ -2.14
LSM6P62312 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.66□□□□□ -2.14
LSM6P62312 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.66□□□□□ -2.14
LSM6P62312 AC243960.4-201ENST00000600532 288 ntBASIC1.66□□□□□ -2.14
LSM6P62312 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.66□□□□□ -2.14
LSM6P62312 AC239868.4-201ENST00000608318 671 ntBASIC1.66□□□□□ -2.14
LSM6P62312 AL596245.1-201ENST00000618994 362 ntBASIC1.66□□□□□ -2.14
LSM6P62312 AC005539.1-201ENST00000443768 1479 ntBASIC1.66□□□□□ -2.14
LSM6P62312 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LSM6P62312 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.14
LSM6P62312 AL359854.1-201ENST00000614203 1594 ntBASIC1.65□□□□□ -2.15
LSM6P62312 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
LSM6P62312 U8.2-201ENST00000363156 134 ntBASIC1.65□□□□□ -2.15
LSM6P62312 RPL23AP29-201ENST00000397284 453 ntBASIC1.65□□□□□ -2.15
LSM6P62312 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM6P62312 AL158823.1-201ENST00000418441 478 ntBASIC1.65□□□□□ -2.15
LSM6P62312 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM6P62312 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM6P62312 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM6P62312 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.65□□□□□ -2.15
LSM6P62312 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM6P62312 MTND3P4-201ENST00000453537 303 ntBASIC1.65□□□□□ -2.15
LSM6P62312 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM6P62312 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM6P62312 RNA5SP182-201ENST00000516064 82 ntBASIC1.65□□□□□ -2.15
LSM6P62312 RNU6-528P-201ENST00000516926 100 ntBASIC1.65□□□□□ -2.15
LSM6P62312 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM6P62312 MIR3122-201ENST00000577243 73 ntBASIC1.65□□□□□ -2.15
LSM6P62312 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.65□□□□□ -2.15
LSM6P62312 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM6P62312 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.65□□□□□ -2.15
LSM6P62312 AC106052.1-201ENST00000608029 497 ntBASIC1.65□□□□□ -2.15
LSM6P62312 AC024257.5-201ENST00000612739 531 ntBASIC1.65□□□□□ -2.15
LSM6P62312 AL590099.1-201ENST00000615276 138 ntBASIC1.65□□□□□ -2.15
LSM6P62312 AC024581.2-201ENST00000619986 252 ntBASIC1.65□□□□□ -2.15
LSM6P62312 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.65□□□□□ -2.15
LSM6P62312 AC104820.1-201ENST00000624183 307 ntBASIC1.65□□□□□ -2.15
LSM6P62312 AC110994.2-201ENST00000635481 492 ntBASIC1.65□□□□□ -2.15
LSM6P62312 MTND5P29-201ENST00000458676 1807 ntBASIC1.65□□□□□ -2.15
LSM6P62312 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
LSM6P62312 RNA5SP240-201ENST00000365355 128 ntBASIC1.64□□□□□ -2.15
LSM6P62312 SNORA40.19-201ENST00000390846 128 ntBASIC1.64□□□□□ -2.15
LSM6P62312 AL356421.1-201ENST00000403255 413 ntBASIC1.64□□□□□ -2.15
LSM6P62312 MTCYBP38-201ENST00000417160 1123 ntBASIC1.64□□□□□ -2.15
LSM6P62312 MTCYBP45-201ENST00000435243 565 ntBASIC1.64□□□□□ -2.15
LSM6P62312 AC092393.1-201ENST00000439625 742 ntBASIC1.64□□□□□ -2.15
LSM6P62312 FABP5P13-201ENST00000452144 328 ntBASIC1.64□□□□□ -2.15
LSM6P62312 OFD1P3Y-201ENST00000453312 783 ntBASIC1.64□□□□□ -2.15
LSM6P62312 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM6P62312 SNORA59A-201ENST00000459326 152 ntBASIC1.64□□□□□ -2.15
LSM6P62312 AC020699.1-201ENST00000505161 445 ntBASIC1.64□□□□□ -2.15
LSM6P62312 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM6P62312 HMGN1P28-201ENST00000521340 364 ntBASIC1.64□□□□□ -2.15
LSM6P62312 AC090615.1-201ENST00000577519 154 ntBASIC1.64□□□□□ -2.15
LSM6P62312 MIR4513-201ENST00000581077 86 ntBASIC1.64□□□□□ -2.15
LSM6P62312 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM6P62312 AC002545.1-201ENST00000592511 181 ntBASIC1.64□□□□□ -2.15
LSM6P62312 SNRPGP19-201ENST00000603826 189 ntBASIC1.64□□□□□ -2.15
LSM6P62312 AL138963.2-201ENST00000605137 226 ntBASIC1.64□□□□□ -2.15
LSM6P62312 AL121652.1-201ENST00000608851 448 ntBASIC1.64□□□□□ -2.15
LSM6P62312 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM6P62312 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.64□□□□□ -2.15
LSM6P62312 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.63□□□□□ -2.15
LSM6P62312 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LSM6P62312 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
LSM6P62312 SNORA16.1-201ENST00000364597 132 ntBASIC1.63□□□□□ -2.15
LSM6P62312 RNU6-234P-201ENST00000365229 104 ntBASIC1.63□□□□□ -2.15
LSM6P62312 AC083799.1-201ENST00000366451 910 ntBASIC1.63□□□□□ -2.15
LSM6P62312 SNORA70B-201ENST00000384210 135 ntBASIC1.63□□□□□ -2.15
LSM6P62312 MIR506-201ENST00000384998 124 ntBASIC1.63□□□□□ -2.15
LSM6P62312 AL079342.1-201ENST00000401460 267 ntBASIC1.63□□□□□ -2.15
LSM6P62312 RNU2-20P-201ENST00000410425 191 ntBASIC1.63□□□□□ -2.15
LSM6P62312 SNORD56-201ENST00000413522 71 ntBASIC1.63□□□□□ -2.15
LSM6P62312 AL161449.1-201ENST00000414531 1199 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms