Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.19□□□□□ -2.22
CKS1BP61024 AC104454.1-201ENST00000421341 1401 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.19□□□□□ -2.22
CKS1BP61024 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.19□□□□□ -2.22
CKS1BP61024 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.19□□□□□ -2.22
CKS1BP61024 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.19□□□□□ -2.22
CKS1BP61024 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.19□□□□□ -2.22
CKS1BP61024 AC098862.1-201ENST00000504991 413 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 AC069306.1-201ENST00000507006 843 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.19□□□□□ -2.22
CKS1BP61024 AC010486.1-201ENST00000511793 424 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 SNORD19.2-201ENST00000516978 73 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.19□□□□□ -2.22
CKS1BP61024 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CKS1BP61024 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.19□□□□□ -2.22
CKS1BP61024 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CKS1BP61024 BNIP3P22-201ENST00000593399 556 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 AP003973.1-201ENST00000604639 691 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 AC009974.1-201ENST00000608881 455 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 MIR5739-201ENST00000619803 80 ntBASIC1.19□□□□□ -2.22
CKS1BP61024 SNORD48-201ENST00000364953 64 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 MIR150-201ENST00000385048 84 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 AL109755.1-201ENST00000401791 649 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 RNU2-33P-201ENST00000410344 192 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 RPL30P13-201ENST00000418873 348 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 AC244453.4-201ENST00000419150 388 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 AC246680.2-201ENST00000422106 389 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.18□□□□□ -2.22
CKS1BP61024 AC244035.1-201ENST00000430042 390 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 Z98742.2-201ENST00000431564 187 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.18□□□□□ -2.22
CKS1BP61024 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.18□□□□□ -2.22
CKS1BP61024 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.18□□□□□ -2.22
CKS1BP61024 CYP2C59P-201ENST00000457790 269 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CKS1BP61024 FO393415.2-201ENST00000480085 343 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.18□□□□□ -2.22
CKS1BP61024 COX7A2P2-201ENST00000505291 250 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 SNORA26.10-201ENST00000516427 141 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.18□□□□□ -2.22
CKS1BP61024 AC026271.5-201ENST00000577873 130 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 AC104763.2-201ENST00000604179 382 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC1.18□□□□□ -2.22
CKS1BP61024 MIR7974-201ENST00000615835 79 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 AL445493.3-201ENST00000619568 477 ntBASIC1.18□□□□□ -2.22
CKS1BP61024 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.18□□□□□ -2.22
CKS1BP61024 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CKS1BP61024 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CKS1BP61024 ZNF29P-201ENST00000225587 168 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CKS1BP61024 RNU1-62P-201ENST00000362599 164 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 RNA5SP27-201ENST00000363839 119 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 SNORD26-201ENST00000384147 75 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 BTF3L4P2-201ENST00000392798 346 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 CCDC58P2-201ENST00000417131 366 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 AL449283.1-202ENST00000418249 604 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 Z98742.3-201ENST00000418637 326 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 AL139415.2-201ENST00000431968 163 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 MTND2P21-201ENST00000436242 1042 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 FABP5P13-201ENST00000452144 328 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.17□□□□□ -2.22
CKS1BP61024 HMGN2P23-201ENST00000456759 269 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 AC117503.1-201ENST00000472241 394 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 AC007182.2-201ENST00000489251 402 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 AC109471.1-201ENST00000511631 612 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.17□□□□□ -2.22
CKS1BP61024 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.17□□□□□ -2.22
CKS1BP61024 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.17□□□□□ -2.22
CKS1BP61024 IGJP1-201ENST00000522682 475 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 AP003066.2-201ENST00000529375 555 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.17□□□□□ -2.22
CKS1BP61024 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CKS1BP61024 AL132857.1-201ENST00000555180 708 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CKS1BP61024 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.17□□□□□ -2.22
CKS1BP61024 AC136601.2-201ENST00000604356 474 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 AC018638.7-201ENST00000605836 1114 ntBASIC1.17□□□□□ -2.22
CKS1BP61024 AP000648.3-201ENST00000623539 4507 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 RPL23AP29-201ENST00000397284 453 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 NDUFS5P4-201ENST00000412983 318 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 AC009310.1-201ENST00000414414 451 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.16□□□□□ -2.22
CKS1BP61024 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.16□□□□□ -2.22
CKS1BP61024 FAM103A2P-201ENST00000444122 354 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 AC106872.3-201ENST00000495104 446 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 CKS1BP2-201ENST00000497342 240 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
CKS1BP61024 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC1.16□□□□□ -2.22
CKS1BP61024 AC034114.1-201ENST00000520293 285 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.16□□□□□ -2.22
CKS1BP61024 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.16□□□□□ -2.22
CKS1BP61024 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.16□□□□□ -2.22
CKS1BP61024 SULT1C2P1-202ENST00000562418 459 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 SUB1P3-201ENST00000564581 315 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.16□□□□□ -2.22
CKS1BP61024 AC087241.4-201ENST00000612441 480 ntBASIC1.16□□□□□ -2.22
CKS1BP61024 YWHAEP7-203ENST00000622054 312 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms