Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 AL138827.1-201ENST00000402666 306 ntBASIC2.75□□□□□ -1.97
SRP54P61011 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.75□□□□□ -1.97
SRP54P61011 BX682237.1-201ENST00000415016 335 ntBASIC2.75□□□□□ -1.97
SRP54P61011 ZNF90P2-204ENST00000419323 1075 ntBASIC2.75□□□□□ -1.97
SRP54P61011 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.75□□□□□ -1.97
SRP54P61011 NUP35P1-201ENST00000422734 947 ntBASIC2.75□□□□□ -1.97
SRP54P61011 RPS27AP14-201ENST00000422868 454 ntBASIC2.75□□□□□ -1.97
SRP54P61011 AC063976.3-201ENST00000426849 329 ntBASIC2.75□□□□□ -1.97
SRP54P61011 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.75□□□□□ -1.97
SRP54P61011 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.75□□□□□ -1.97
SRP54P61011 MTND1P28-201ENST00000435623 950 ntBASIC2.75□□□□□ -1.97
SRP54P61011 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC2.75□□□□□ -1.97
SRP54P61011 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.75□□□□□ -1.97
SRP54P61011 AC108938.1-201ENST00000451204 136 ntBASIC2.75□□□□□ -1.97
SRP54P61011 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.75□□□□□ -1.97
SRP54P61011 SNORA3.4-201ENST00000515969 96 ntBASIC2.75□□□□□ -1.97
SRP54P61011 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.75□□□□□ -1.97
SRP54P61011 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.75□□□□□ -1.97
SRP54P61011 HPRT1P3-201ENST00000539521 576 ntBASIC2.75□□□□□ -1.97
SRP54P61011 ELOCP32-201ENST00000548625 324 ntBASIC2.75□□□□□ -1.97
SRP54P61011 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.75□□□□□ -1.97
SRP54P61011 AL356432.3-201ENST00000568952 465 ntBASIC2.75□□□□□ -1.97
SRP54P61011 MIR3162-201ENST00000581818 82 ntBASIC2.75□□□□□ -1.97
SRP54P61011 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.75□□□□□ -1.97
SRP54P61011 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.75□□□□□ -1.97
SRP54P61011 AC090970.3-201ENST00000612566 866 ntBASIC2.75□□□□□ -1.97
SRP54P61011 AC034102.8-201ENST00000615146 484 ntBASIC2.75□□□□□ -1.97
SRP54P61011 AL136313.1-201ENST00000624804 202 ntBASIC2.75□□□□□ -1.97
SRP54P61011 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.75□□□□□ -1.97
SRP54P61011 AC026241.1-201ENST00000517873 2142 ntBASIC2.75□□□□□ -1.97
SRP54P61011 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SRP54P61011 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SRP54P61011 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SRP54P61011 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SRP54P61011 Y_RNA.97-201ENST00000363094 102 ntBASIC2.74□□□□□ -1.97
SRP54P61011 RNU6-660P-201ENST00000364566 109 ntBASIC2.74□□□□□ -1.97
SRP54P61011 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SRP54P61011 AL360182.1-201ENST00000397433 468 ntBASIC2.74□□□□□ -1.97
SRP54P61011 FO393413.1-201ENST00000402892 195 ntBASIC2.74□□□□□ -1.97
SRP54P61011 BTF3L4P3-201ENST00000418879 476 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AC019097.1-201ENST00000424783 735 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AC010153.1-201ENST00000432862 727 ntBASIC2.74□□□□□ -1.97
SRP54P61011 TIMM9P1-201ENST00000436122 256 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AL008629.1-201ENST00000438615 184 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.74□□□□□ -1.97
SRP54P61011 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.74□□□□□ -1.97
SRP54P61011 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.74□□□□□ -1.97
SRP54P61011 SNORD109B-201ENST00000458961 67 ntBASIC2.74□□□□□ -1.97
SRP54P61011 SNORD109A-201ENST00000459128 67 ntBASIC2.74□□□□□ -1.97
SRP54P61011 RPL21P41-201ENST00000459863 264 ntBASIC2.74□□□□□ -1.97
SRP54P61011 RPL37P6-201ENST00000460682 294 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AC126182.1-201ENST00000478134 357 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AP004217.1-201ENST00000480579 346 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.74□□□□□ -1.97
SRP54P61011 SNORA31.3-201ENST00000516029 96 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AC025881.1-201ENST00000518851 512 ntBASIC2.74□□□□□ -1.97
SRP54P61011 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SRP54P61011 AC004486.1-201ENST00000546846 233 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AC128657.1-201ENST00000549459 145 ntBASIC2.74□□□□□ -1.97
SRP54P61011 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.74□□□□□ -1.97
SRP54P61011 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.74□□□□□ -1.97
SRP54P61011 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SRP54P61011 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.74□□□□□ -1.97
SRP54P61011 KC877982.1-201ENST00000602313 470 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AP000403.1-201ENST00000603349 851 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AL355877.2-201ENST00000603670 358 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AC079395.3-201ENST00000615161 484 ntBASIC2.74□□□□□ -1.97
SRP54P61011 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.74□□□□□ -1.97
SRP54P61011 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SRP54P61011 AC092593.1-201ENST00000515413 1815 ntBASIC2.74□□□□□ -1.97
SRP54P61011 AC104454.1-201ENST00000421341 1401 ntBASIC2.74□□□□□ -1.97
SRP54P61011 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.74□□□□□ -1.97
SRP54P61011 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
SRP54P61011 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.73□□□□□ -1.97
SRP54P61011 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.73□□□□□ -1.97
SRP54P61011 RNU1-112P-201ENST00000364401 164 ntBASIC2.73□□□□□ -1.97
SRP54P61011 MIR9-1-201ENST00000385198 89 ntBASIC2.73□□□□□ -1.97
SRP54P61011 MIR181B1-201ENST00000385240 110 ntBASIC2.73□□□□□ -1.97
SRP54P61011 RNU2-52P-201ENST00000410680 190 ntBASIC2.73□□□□□ -1.97
SRP54P61011 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.73□□□□□ -1.97
SRP54P61011 NDUFS5P4-201ENST00000412983 318 ntBASIC2.73□□□□□ -1.97
SRP54P61011 HMGB1P9-201ENST00000429856 646 ntBASIC2.73□□□□□ -1.97
SRP54P61011 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.73□□□□□ -1.97
SRP54P61011 FCF1P1-201ENST00000432690 571 ntBASIC2.73□□□□□ -1.97
SRP54P61011 RPL36AP6-201ENST00000435770 321 ntBASIC2.73□□□□□ -1.97
SRP54P61011 RPS15AP5-201ENST00000436276 388 ntBASIC2.73□□□□□ -1.97
SRP54P61011 AC009296.1-201ENST00000443146 155 ntBASIC2.73□□□□□ -1.97
SRP54P61011 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.73□□□□□ -1.97
SRP54P61011 AL109933.2-201ENST00000452651 260 ntBASIC2.73□□□□□ -1.97
SRP54P61011 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.73□□□□□ -1.97
SRP54P61011 AC027673.1-201ENST00000456245 405 ntBASIC2.73□□□□□ -1.97
SRP54P61011 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC2.73□□□□□ -1.97
SRP54P61011 MTCO1P42-201ENST00000457379 726 ntBASIC2.73□□□□□ -1.97
SRP54P61011 LINC00888-204ENST00000487386 421 ntBASIC2.73□□□□□ -1.97
SRP54P61011 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.73□□□□□ -1.97
SRP54P61011 RNU6-201P-201ENST00000517100 61 ntBASIC2.73□□□□□ -1.97
SRP54P61011 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
SRP54P61011 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.73□□□□□ -1.97
SRP54P61011 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.73□□□□□ -1.97
SRP54P61011 MIR3670-2-201ENST00000582974 65 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms