Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LIMK1P53667 OR56A5-201ENST00000340110 738 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 U3.11-201ENST00000364476 212 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 Y_RNA.598-201ENST00000410480 95 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AL513331.1-201ENST00000411908 397 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 Z99755.1-201ENST00000414048 380 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 EEF1A1P41-201ENST00000414667 207 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AC090960.1-201ENST00000421072 306 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AL139132.1-201ENST00000431587 344 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AC119618.1-201ENST00000434191 222 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AC005094.1-201ENST00000440420 368 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 PIGFP3-201ENST00000441918 722 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 CBWD4P-201ENST00000445695 655 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.13□□□□□ -1.91
LIMK1P53667 GAPDHP27-201ENST00000447427 1020 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.13□□□□□ -1.91
LIMK1P53667 snoU13.28-201ENST00000459235 104 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
LIMK1P53667 NRON-201ENST00000517270 370 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
LIMK1P53667 AP002748.2-201ENST00000528671 348 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 HSPE1P20-201ENST00000538133 289 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.13□□□□□ -1.91
LIMK1P53667 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.13□□□□□ -1.91
LIMK1P53667 AC015917.1-201ENST00000579654 510 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AC104763.2-201ENST00000604179 382 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AC112191.3-201ENST00000604371 277 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AL035413.2-201ENST00000604801 525 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AC068276.1-201ENST00000605793 379 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 RNU6-87P-201ENST00000607561 108 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AC073114.1-201ENST00000612027 490 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.13□□□□□ -1.91
LIMK1P53667 AC073308.1-201ENST00000623696 305 ntBASIC3.13□□□□□ -1.91
LIMK1P53667 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.13□□□□□ -1.91
LIMK1P53667 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK1P53667 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
LIMK1P53667 RNU6-1180P-201ENST00000364935 107 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 U8.9-201ENST00000365667 134 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 SNORD115.1-201ENST00000391109 76 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 RNU6-193P-201ENST00000410977 107 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK1P53667 NPM1P11-201ENST00000417106 855 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AC009518.2-201ENST00000418056 731 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AL451054.2-201ENST00000420896 202 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 NUP35P1-201ENST00000422734 947 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.12□□□□□ -1.91
LIMK1P53667 OR2AS1P-201ENST00000427827 319 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 RPL21P2-201ENST00000440049 481 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AC093156.1-201ENST00000440382 670 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK1P53667 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK1P53667 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.12□□□□□ -1.91
LIMK1P53667 RPL37P6-201ENST00000460682 294 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 MTND5P13-201ENST00000513046 1079 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 SNORA70.19-201ENST00000516717 90 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AC022878.1-201ENST00000530684 149 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK1P53667 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.12□□□□□ -1.91
LIMK1P53667 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.12□□□□□ -1.91
LIMK1P53667 AMZ2P1-203ENST00000565833 850 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 MIR2682-201ENST00000580305 110 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 UBL5P2-201ENST00000583788 219 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 MIR4506-201ENST00000584693 77 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 BNIP3P8-201ENST00000597863 560 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 CLIC4P2-201ENST00000601934 717 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AL590229.1-201ENST00000603497 542 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AL136363.1-201ENST00000605349 337 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AC108747.1-201ENST00000609508 535 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 SNORD39.4-201ENST00000620099 78 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 AC007785.2-201ENST00000598627 1916 ntBASIC3.12□□□□□ -1.91
LIMK1P53667 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LIMK1P53667 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LIMK1P53667 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LIMK1P53667 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LIMK1P53667 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
LIMK1P53667 AC092104.1-201ENST00000497346 1441 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
LIMK1P53667 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.11□□□□□ -1.91
LIMK1P53667 OR1S2-201ENST00000302592 978 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 RNY3P10-201ENST00000384764 102 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 SNORA26.7-201ENST00000391288 122 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 RPL21P3-201ENST00000395517 478 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 RPS4XP8-201ENST00000402039 771 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMK1P53667 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 CYCSP46-201ENST00000423569 204 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 AC105272.1-201ENST00000438604 198 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMK1P53667 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMK1P53667 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.11□□□□□ -1.91
LIMK1P53667 SNRPGP9-201ENST00000456025 225 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 AC146507.2-201ENST00000460608 476 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.11□□□□□ -1.91
LIMK1P53667 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.11□□□□□ -1.91
LIMK1P53667 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.11□□□□□ -1.91
LIMK1P53667 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC3.11□□□□□ -1.91
LIMK1P53667 RNU6-1282P-201ENST00000516735 96 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 RNU6-928P-201ENST00000516876 104 ntBASIC3.11□□□□□ -1.91
LIMK1P53667 AC009812.2-201ENST00000517657 457 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms